Detailed information on CNT30364284


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693928Sorghum bicolorOryza sativa33.331.9992.7783reverse complement
CNT30541469Sorghum bicolorBrassica napus23.693.8691.5359reverse complement
CNT30553279Sorghum bicolorOryza glaberrima33.337.7393.9883reverse complement
CNT30147499Sorghum bicolorMedicago truncatula24.53.8788.5261reverse complement
CNT30310337Sorghum bicolorCamelina sativa22.093.2990.9155reverse complement
CNT3083474Sorghum bicolorBrassica juncea23.691.7791.5359reverse complement
CNT30134355Sorghum bicolorLolium perenne31.733.1492.4179reverse complement
CNT30689031Sorghum bicolorTriticum urartu33.331.4995.1883reverse complement
CNT30576477Sorghum bicolorOryza barthii29.7216.1293.2474reverse complement
CNT30585636Sorghum bicolorEchinochloa crusgalli33.331.4595.1883reverse complement
CNT30604550Sorghum bicolorOryza punctata33.733.8389.2984reverse complement

Expression of CNT30364284

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MLYMVMAAPIVPKSRTSYFENKNRKIGEKYMTEKK*

>peptide 2 (32 aa)
DREARLNRIGEKFYVIYGNGRTYSTQISNFLF*

Sequence

>CNT30364284
AGATCGAGAAGCTCGACTAAACAGAATTGGGGAGAAGTTTTATGTTATATATGGTAATGGCCGCACCTATAGTACCCAAATCTCGAACTTCCTATTTTGA
AAATAAAAATAGAAAAATAGGAGAAAAATATATGACAGAAAAAAAATAGGAGAGAAAAAAAACCCGAGAGAAGCAAAAGTAACTTTCGAAGGTTTAATTA
CGGAAGCCCTACCCAACGGAATGTTCTGCGTTCGCCTAGAGAATGCCAC