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Detailed information on CNT30628784


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 9e-157

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523536Vigna unguiculataSetaria italica41.1355.482.43313forward
CNT30640872Vigna unguiculataNymphaea colorata84.6385.0778.73644forward
CNT30536082Vigna unguiculataEucalyptus grandis54.469.9380.68414forward
CNT30549166Vigna unguiculataIpomoea triloba42.3147.9279.19322forward
CNT30700805Vigna unguiculataQuercus lobata37.7194.7281.53287forward
CNT30524942Vigna unguiculataPhaseolus vulgaris90.67102.8390.87690forward
CNT30710467Vigna unguiculataGlycine max97.24102.3585.27740forward
CNT3042435Vigna unguiculataPrunus dulcis87.5296.2480.03666forward
CNT3087851Vigna unguiculataVigna radiata102.185.0190.99777forward
CNT30171519Vigna unguiculataTrifolium pratense27.8662.3587.74212forward
CNT30607989Vigna unguiculataGossypium raimondii88.9696.9980.21677forward
CNT30648676Vigna unguiculataRosa chinensis74.7776.3879.96569forward
CNT30350937Vigna unguiculataEragrostis tef35.7449.1980.51272forward
CNT30366537Vigna unguiculataSorghum bicolor44.8139.1180.94341forward
CNT30620207Vigna unguiculataCajanus cajan21.427.5893.87163forward
CNT30154791Vigna unguiculataPrunus persica94.8892.9281.16722forward
CNT30705859Vigna unguiculataPrunus avium71.0972.4281.15541forward
CNT3028162Vigna unguiculataTheobroma cacao65.3188.5979.88497forward
CNT3051702Vigna unguiculataAmborella trichopoda59.2673.6978.94451forward
CNT3023560Vigna unguiculataPopulus trichocarpa29.0446.4383.26221forward
CNT30121168Vigna unguiculataCitrus clementina61.6344.1681.02469forward
CNT30330871Vigna unguiculataDioscorea rotundata35.7437.6281.25272forward

Expression of CNT30628784

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MWGCTQAMMDYSLEMMDCTREMRWEKMPSHQHKVKTGHPT*

>peptide 2 (37 aa)
SLGMWDYMDLMETILDCLENMPMKDCTLLTGDCNLGK*

Sequence

>CNT30628784
GTAGTTTGGGGATGTGGGACTATATGGACTTGATGGAGACAATCTTGGACTGCTTGGAGAATATGCCAATGAAGGACTGTACTTTGCTGACTGGGGATTG
TAACTTGGGGAAGTAGGACTATACGATGGGGATGTTGGGCTATATGAGGGTGACGTAGGGCTGTATCCAGGTGAAGTGGGGCTGTAAGCAGGGGATGCAG
GGCTATATGATGGGGAGGTAGGGCTGTAAGAGGGTGAAGTGGGGCTGTATGAAGGTGAGGTAGGACTATATGAAGGTGACGTAGGGCTGTAGGAAGGTGA
AGTGGGACTATATGCAGGTGAAGTCGGGCTGTAGCTGGGAGAAGTTGGGCTATAACTGGGTGATGTGGGGCTGTAGCTGGGTGATGTAGGACTGTAGCTG
GGTGATGTTGGGCTATAGCTGGGTGATGTGGGAGAGTAGGATGGACTGGTTGGCGAATAAGCCGGACTTGTAGGACTATATCCTGGAGAACTAGGGCTAT
ACGTGGGAGAGGTCGGACTGTAACCTGGTGATGTGGGACTGTAGCCCGGAGATGTAGGACTGTACCCAGGTGATGTGGGGCTGTACCCAGGCGATGATGG
ACTATAGCCTGGAGATGATGGACTGTACCCGGGAGATGAGGTGGGAGAAAATGCCATCCCACCAACATAAGGTGAAAACTGGGCATCCGACGTAGGAGAC
AGACGCAAATTTGGACTCAACAAATAACTAGGAGACATCACGGTGTCATGATACGGAGTTC