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Detailed information on CNT30524942


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 1e-174

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523536Phaseolus vulgarisSetaria italica46.6555.480.19313forward
CNT30640872Phaseolus vulgarisNymphaea colorata70.0462.0980.85470forward
CNT30536082Phaseolus vulgarisEucalyptus grandis62.1570.4479.62417forward
CNT30316118Phaseolus vulgarisCorylus avellana66.3262.3280.67445forward
CNT30516897Phaseolus vulgarisJuglans regia97.0273.6481.11651forward
CNT30700805Phaseolus vulgarisQuercus lobata42.7794.7281.18287forward
CNT30376379Phaseolus vulgarisArabidopsis thaliana77.269.6278.57518forward
CNT30500730Phaseolus vulgarisCoffea canephora56.1843.6379.05377forward
CNT30616460Phaseolus vulgarisSesamum indicum79.4337.1478.05533forward
CNT30267761Phaseolus vulgarisChenopodium quinoa57.5347.380.57386forward
CNT3021339Phaseolus vulgarisCitrullus lanatus58.4261.8382.65392forward
CNT30727661Phaseolus vulgarisCorchorus capsularis89.7296.1778.24602forward
CNT30378927Phaseolus vulgarisManihot esculenta53.9558.4880.11362forward
CNT30628784Phaseolus vulgarisVigna unguiculata102.8390.6790.87690forward
CNT30195835Phaseolus vulgarisPisum sativum31.5983.4688.21212forward
CNT30489068Phaseolus vulgarisOlea europaea61.18379.76410forward
CNT30506120Phaseolus vulgarisNicotiana attenuata45.0151.6282.78302forward
CNT30710467Phaseolus vulgarisGlycine max102.2494.8884.84686forward
CNT3042412Phaseolus vulgarisPrunus dulcis85.2577.1981.99572forward
CNT3091192Phaseolus vulgarisSolanum tuberosum74.8172.4480.28502forward
CNT30304911Phaseolus vulgarisTriticum aestivum21.3123.9183.92143forward
CNT30400271Phaseolus vulgarisTriticum turgidum42.0356.9780.85282forward
CNT30559890Phaseolus vulgarisActinidia chinensis48.5847.7381.29326forward
CNT30591858Phaseolus vulgarisMusa acuminata56.6374.9580380forward
CNT3087851Phaseolus vulgarisVigna radiata102.0974.9589.64685forward
CNT30235097Phaseolus vulgarisBrassica oleracea76.363.9278.52512forward
CNT30508722Phaseolus vulgarisSolanum lycopersicum69.991.4279.32469forward
CNT30554580Phaseolus vulgarisOryza glaberrima38.337.7980.54257forward
CNT30171519Phaseolus vulgarisTrifolium pratense33.8366.7686.34227forward
CNT30145737Phaseolus vulgarisMedicago truncatula64.3870.1386.57432forward
CNT30256659Phaseolus vulgarisAvena sativa20.8619.5884.29140forward
CNT30311656Phaseolus vulgarisCamelina sativa49.4859.8281.33332forward
CNT3076593Phaseolus vulgarisBrassica juncea76.393.7777.93512forward
CNT30263540Phaseolus vulgarisBrassica rapa65.2867.9178.31438forward
CNT30468644Phaseolus vulgarisSaccharum spontaneum50.8236.2479.47341forward
CNT30140910Phaseolus vulgarisLolium perenne32.4961.0681.19218forward
CNT3017147Phaseolus vulgarisZea mays41.8839.382.92281forward
CNT30607989Phaseolus vulgarisGossypium raimondii90.6187.1178.95608forward
CNT30688491Phaseolus vulgarisTriticum urartu42.3266.3680.99284forward
CNT30341749Phaseolus vulgarisEragrostis tef39.259.181.75263forward
CNT30476914Phaseolus vulgarisArabidopsis halleri37.4144.8282.07251forward
CNT30620207Phaseolus vulgarisCajanus cajan46.3514.4783.6311forward
CNT30354661Phaseolus vulgarisLactuca sativa32.0438.6783.26215forward
CNT30370935Phaseolus vulgarisOryza glumipatula38.7526.8680.38260forward
CNT30154712Phaseolus vulgarisPrunus persica96.8783.4482.15650forward
CNT30408809Phaseolus vulgarisPapaver somniferum53.0641.282.02356forward
CNT30573855Phaseolus vulgarisVitis vinifera54.460.6380.82365forward
CNT30705862Phaseolus vulgarisPrunus avium89.2756.480.8599forward
CNT30641843Phaseolus vulgarisCannabis sativa46.3564.6680.39311forward
CNT3027877Phaseolus vulgarisTheobroma cacao56.6396.281.84380forward
CNT3051605Phaseolus vulgarisAmborella trichopoda36.0736.583.47242forward
CNT30121049Phaseolus vulgarisCitrus clementina58.8736.5179.49395forward
CNT3035176Phaseolus vulgarisCucumis melo51.7163.0980.98347forward
CNT30330867Phaseolus vulgarisDioscorea rotundata37.4134.7280.88251forward
CNT30149986Phaseolus vulgarisBrachypodium distachyon41.2830.8880.51277forward
CNT30103220Phaseolus vulgarisOryza rufipogon40.5429.2880.88272forward
CNT30577348Phaseolus vulgarisOryza barthii20.4253.3184.67137forward
CNT30176441Phaseolus vulgarisVigna angularis89.5799.3491.01601forward
CNT30558075Phaseolus vulgarisPanicum hallii40.5434.4781.25272forward
CNT30551544Phaseolus vulgarisOryza brachyantha45.0143.4580.13302forward
CNT3049544Phaseolus vulgarisCucumis sativus66.9256.0581.29449forward

Expression of CNT30524942

Peptides detected in this lncRNA

>peptide 1 (38 aa)
CSLGMWDYMDLMETILDCLENMLTKDYTLLTVDCNLGK*

>peptide 2 (39 aa)
MQVKWGCSWEMWGYNWVMWGCSWVTWGYSWVMWESRMDW*

>peptide 3 (38 aa)
MWDCTQAMMDYSLGMMDCTQEMRWEKMPSHQHKVKIGHP

Sequence

>CNT30524942
CTGTAGTTTGGGGATGTGGGACTATATGGACTTGATGGAGACAATCTTGGACTGCTTGGAGAATATGCTAACGAAGGACTATACTTTGCTGACTGTAGAT
TGTAACTTGGGGAAGTAGGACTATACGTTGGGGATGTTGGGCTATATGAGGGTGACGTAGGGCTGTATCCAGGTGACGTGGGGCTGTAGGCAGGGGATGT
AGGGCTATATGATGGGGAGGTCGGGCTGTAAGAGGGTGATGTGGGGCTGTAGGAAGGTGAAGTAGGACTATATGAAGGTGATGTAGGACTGTAGGAAGGT
GAAGTCGGACTATAAGCAGGTGAAGTGGGGCTGTATGCAGGTGAAGTGGGGCTGTAGCTGGGAGATGTGGGGCTATAACTGGGTGATGTGGGGCTGTAGC
TGGGTGACGTGGGGCTATAGCTGGGTGATGTGGGAGAGTAGGATGGACTGGTAGGCGAATAAGCCGGACTTGTAGGACTATATCCTGGAGAACTAGGGCT
ATATGTCGGAGAGGTCGGACTGTAACCTGGTGATGTAGGGCTGTAGCCCGGAGATGTGGGACTGTACCCAGGCGATGATGGACTATAGCCTGGGGATGAT
GGACTGTACCCAGGAGATGAGGTGGGAGAAAATGCCATCCCACCAACATAAGGTGAAAATTGGGCATCCGA