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Detailed information on CNT3042435

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 5e-75

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30640872	Prunus dulcis	Nymphaea colorata	86.56	79.13	81.8	599	forward
CNT30536082	Prunus dulcis	Eucalyptus grandis	78.32	91.55	80.81	542	forward
CNT30315993	Prunus dulcis	Corylus avellana	71.53	49.35	82.63	495	forward
CNT30549166	Prunus dulcis	Ipomoea triloba	47.54	48.96	82.98	329	forward
CNT30516792	Prunus dulcis	Juglans regia	101.3	78.76	80.6	701	forward
CNT30377104	Prunus dulcis	Arabidopsis thaliana	78.32	76.77	81.37	542	forward
CNT30500730	Prunus dulcis	Coffea canephora	64.45	51.62	82.06	446	forward
CNT30616458	Prunus dulcis	Sesamum indicum	72.11	67.71	80.96	499	forward
CNT3021339	Prunus dulcis	Citrullus lanatus	77.75	84.86	81.41	538	forward
CNT30727661	Prunus dulcis	Corchorus capsularis	83.09	91.85	82.96	575	forward
CNT30378927	Prunus dulcis	Manihot esculenta	57.95	64.78	82.79	401	forward
CNT30628784	Prunus dulcis	Vigna unguiculata	96.24	87.52	80.03	666	forward
CNT30489004	Prunus dulcis	Olea europaea	37.43	42.18	82.63	259	forward
CNT30710467	Prunus dulcis	Glycine max	62.28	59.61	83.53	431	forward
CNT3091337	Prunus dulcis	Solanum tuberosum	49.57	42.03	81.05	343	forward
CNT30559890	Prunus dulcis	Actinidia chinensis	83.38	84.48	80.42	577	forward
CNT30591858	Prunus dulcis	Musa acuminata	58.82	80.28	80.84	407	forward
CNT30234460	Prunus dulcis	Brassica oleracea	75.29	74.11	81.57	521	forward
CNT30508904	Prunus dulcis	Solanum lycopersicum	79.19	88.67	77.92	548	forward
CNT30554721	Prunus dulcis	Oryza glaberrima	54.34	40.21	80.05	376	forward
CNT30145737	Prunus dulcis	Medicago truncatula	40.17	45.13	81.29	278	forward
CNT30256659	Prunus dulcis	Avena sativa	39.31	38.04	82.35	272	forward
CNT30311656	Prunus dulcis	Camelina sativa	68.35	85.23	82.45	473	forward
CNT3062262	Prunus dulcis	Arabidopsis lyrata	65.75	83.03	80.44	455	forward
CNT3076593	Prunus dulcis	Brassica juncea	70.95	89.93	80.86	491	forward
CNT30263540	Prunus dulcis	Brassica rapa	59.39	63.72	81.51	411	forward
CNT30468674	Prunus dulcis	Saccharum spontaneum	32.8	24.75	82.38	227	forward
CNT3017147	Prunus dulcis	Zea mays	58.09	56.22	80.85	402	forward
CNT30607743	Prunus dulcis	Gossypium raimondii	91.04	93.33	82.22	630	forward
CNT30216750	Prunus dulcis	Kalanchoe fedtschenkoi	50.58	71.43	80.57	350	forward
CNT3067979	Prunus dulcis	Leersia perrieri	42.49	81.67	81.63	294	forward
CNT30648676	Prunus dulcis	Rosa chinensis	98.12	91.14	85.13	679	forward
CNT30625720	Prunus dulcis	Daucus carota	47.54	28.78	80.55	329	forward
CNT30688491	Prunus dulcis	Triticum urartu	39.74	64.25	81.45	275	forward
CNT30341749	Prunus dulcis	Eragrostis tef	53.18	82.7	81.52	368	forward
CNT30476941	Prunus dulcis	Arabidopsis halleri	78.76	68.04	81.28	545	forward
CNT30366857	Prunus dulcis	Sorghum bicolor	54.48	38.39	82.23	377	forward
CNT30354836	Prunus dulcis	Lactuca sativa	38.29	45.93	82.64	265	forward
CNT30370935	Prunus dulcis	Oryza glumipatula	40.17	28.72	82.37	278	forward
CNT30154742	Prunus dulcis	Prunus persica	98.27	81.05	99.26	680	forward
CNT30408809	Prunus dulcis	Papaver somniferum	87.43	70.02	78.68	605	forward
CNT30573870	Prunus dulcis	Vitis vinifera	96.39	94.61	81.71	667	forward
CNT30705859	Prunus dulcis	Prunus avium	77.89	72.16	95.92	539	forward
CNT30642027	Prunus dulcis	Cannabis sativa	63.73	69.12	85.03	441	forward
CNT3027877	Prunus dulcis	Theobroma cacao	47.98	84.05	84.64	332	forward
CNT3051605	Prunus dulcis	Amborella trichopoda	75.29	78.58	78.31	521	forward
CNT30121049	Prunus dulcis	Citrus clementina	99.13	63.4	82.8	686	forward
CNT3035176	Prunus dulcis	Cucumis melo	70.09	88.18	82.06	485	forward
CNT30330871	Prunus dulcis	Dioscorea rotundata	45.81	43.85	82.33	317	forward
CNT30150463	Prunus dulcis	Brachypodium distachyon	46.68	36.75	80.5	323	forward
CNT30103173	Prunus dulcis	Oryza rufipogon	42.34	30.18	81.91	293	forward
CNT30584450	Prunus dulcis	Echinochloa crusgalli	61.42	56.74	80.24	425	forward
CNT30497905	Prunus dulcis	Digitaria exilis	41.91	32.12	80.34	290	forward
CNT30176441	Prunus dulcis	Vigna angularis	80.64	92.23	81.54	558	forward
CNT30558075	Prunus dulcis	Panicum hallii	39.74	34.85	82.91	275	forward
CNT30551544	Prunus dulcis	Oryza brachyantha	48.12	47.91	81.08	333	forward
CNT3049385	Prunus dulcis	Cucumis sativus	75.72	66.16	85.69	524	forward

Expression of CNT3042435

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MWDYMQVKSGCKQVMLDCNLVKLDCNLEM*

Sequence

>CNT3042435
CTTGGGCTGCTTGGAGAGTATGCCGACGATGGACTGTATTTGGCTGACTGAGGATTGTAACTTGGAGATGTAGGGCTATAGCTGGGAGAAGTTGGACTAT
AACTAGGAGAAGTTGGGCTGTAACCAGGAGAAGTTGGGCTGTAGGCTGGTGAGGTTGGGCTGTAGGATGGAGATGTGGGGCTGTAGGAGGGCGACGTTGG
GCTGTAGGAAGGTGATGTAGGGCTATAGGACGGCGATGTAGGGCTGTAGGAAGGTGATGTGGGACTATATGCAGGTGAAGTCGGGCTGTAAGCAGGTGAT
GTTGGACTGTAACTTGGTGAAGTTGGACTGTAACTTGGAGATGTAGGGCTGTAACTTGGAGATGTGGGGCTGTAACTTGGAGAAGTGGGGCTATAGCTGG
GTGAGGTGGGTGAGTATGATGGACTTGTAGGAGAATAGGCCGGACTGGTTGGACTATAACCTGGAGAACTAGGACTATAGGTTGGAGAGGTGGGACTGTA
CCCAGGTGAAGTGGGGCTGTACCCGGGCGAGGTGGGACTATAACCAGGGGACGTGGGACTGTATCCAGGGGAGGACGGACTGTAGCCAGGGGATGATGGG
CTGTAGCCCGGAGATGAAGTAGGAGAGAATGCCATTCCTCCAACATAGGGAGAAAACTGGGCATCTGAAATGGGTGACAGACGAAGGTTTGG