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Detailed information on CNT30549166


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 1e-63

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523536Ipomoea trilobaSetaria italica40.9248.6780275forward
CNT30640872Ipomoea trilobaNymphaea colorata44.4939.580.6299forward
CNT30536082Ipomoea trilobaEucalyptus grandis40.4845.9582.35272forward
CNT30315800Ipomoea trilobaCorylus avellana40.9259.7881.45275forward
CNT30500730Ipomoea trilobaCoffea canephora75.358.5680.04506forward
CNT30616384Ipomoea trilobaSesamum indicum26.3426.2686.44177forward
CNT30269270Ipomoea trilobaChenopodium quinoa45.3958.180.33305forward
CNT3021333Ipomoea trilobaCitrullus lanatus45.8352.0381.17308forward
CNT30379091Ipomoea trilobaManihot esculenta51.1958.3182.27344forward
CNT30403468Ipomoea trilobaBeta vulgaris76.1966.1577.54512forward
CNT30628784Ipomoea trilobaVigna unguiculata47.9242.3179.19322forward
CNT30506121Ipomoea trilobaNicotiana attenuata49.780.6882.93334forward
CNT30710467Ipomoea trilobaGlycine max75.369.9979.45506forward
CNT3042435Ipomoea trilobaPrunus dulcis48.9647.5482.98329forward
CNT3091701Ipomoea trilobaSolanum tuberosum102.0890.2680.61686forward
CNT30400271Ipomoea trilobaTriticum turgidum39.1453.1380.61263forward
CNT30559889Ipomoea trilobaActinidia chinensis19.0531.3785.94128forward
CNT30235097Ipomoea trilobaBrassica oleracea58.3348.9480.1392forward
CNT30508941Ipomoea trilobaSolanum lycopersicum57.1496.7382.03384forward
CNT30554721Ipomoea trilobaOryza glaberrima37.3526.8482.47251forward
CNT30145737Ipomoea trilobaMedicago truncatula27.3829.8784.24184forward
CNT30311656Ipomoea trilobaCamelina sativa45.3954.9581.64305forward
CNT30263848Ipomoea trilobaBrassica rapa40.4864.382.72272forward
CNT30607743Ipomoea trilobaGossypium raimondii41.8241.6382.21281forward
CNT3067979Ipomoea trilobaLeersia perrieri31.158.0683.25209forward
CNT30648676Ipomoea trilobaRosa chinensis63.3957.1881.46426forward
CNT30205370Ipomoea trilobaHelianthus annuus43.644.8781.23293forward
CNT30625277Ipomoea trilobaDaucus carota38.6942.3582.69260forward
CNT30341749Ipomoea trilobaEragrostis tef50.4576.1880.24339forward
CNT30366537Ipomoea trilobaSorghum bicolor27.9821.5682.98188forward
CNT30596736Ipomoea trilobaOryza meridionalis35.5731.6682.01239forward
CNT30354603Ipomoea trilobaLactuca sativa48.2147.8681.48324forward
CNT30370935Ipomoea trilobaOryza glumipatula36.012582.23242forward
CNT30154791Ipomoea trilobaPrunus persica73.5163.5880.57494forward
CNT30410012Ipomoea trilobaPapaver somniferum41.3773.1680.94278forward
CNT30573979Ipomoea trilobaVitis vinifera48.5155.9281.6326forward
CNT30705859Ipomoea trilobaPrunus avium47.1742.4482.02317forward
CNT30642027Ipomoea trilobaCannabis sativa65.1868.6579.45438forward
CNT3051702Ipomoea trilobaAmborella trichopoda58.7864.5478.73395forward
CNT30109704Ipomoea trilobaOryza longistaminata35.1242.4580.51236forward
CNT30121049Ipomoea trilobaCitrus clementina73.9645.9380.89497forward
CNT3035176Ipomoea trilobaCucumis melo48.0758.7380.5323forward
CNT30149777Ipomoea trilobaBrachypodium distachyon42.2630.8479.58284forward
CNT30103004Ipomoea trilobaOryza rufipogon38.2425.7882.1257forward
CNT30497905Ipomoea trilobaDigitaria exilis38.6928.7981.15260forward
CNT30335475Ipomoea trilobaCynara cardunculus42.2621.8680.28284forward
CNT3049385Ipomoea trilobaCucumis sativus65.9255.9379.23443forward

Expression of CNT30549166

Peptides detected in this lncRNA

>peptide 1 (77 aa)
MGMLGCSSVMWDCTQERWDCTLVMWDCRMVMLDYMKVTLGYMMVRLDCKMERWGCRTVRLGCKMEMLGYRQERLGCN*

>peptide 2 (30 aa)
MWGCILGTWGCIQVKMDCIQAMMDYIQGMK*

Sequence

>CNT30549166
CTGTAACTTGGGGAAGAAGGGCTGTAAGGACTAGAAGGAGACAGCTTGGGACTGGTGGGCGAGTACGCAATTGAGGGACTGTATCTCGCTGAAGGATTGT
AGCTTGGTGAGGTGGGACTATAAGATGGGGATGTTGGGCTGTAGCTCGGTGATGTGGGACTGTACCCAGGAGAGGTGGGACTGTACGCTGGTGATGTGGG
ACTGTAGGATGGTGATGTTGGACTATATGAAGGTGACGTTGGGCTATATGATGGTGAGGTTGGACTGTAAGATGGAGAGGTGGGGCTGTAGGACGGTGAG
GTTGGGCTGTAAGATGGAGATGTTGGGCTATAGGCAGGAGAGGTTGGGCTGTAACTAGGAGATGTAGGGCTGTAACTTGGTGACGTAGGGCTGTAGCTTG
GAGAAGTCGGTGAATATGACGGACTGGTTGGAGAATATGCAGGACTAGTGGGGCTGTAACCAGGGGAACTAGGACTATAGGTGGGTGAAGTGGGGCTGTA
TCCTGGGGAAGTGGGGCTGTACCCCGGGGATGTGGGGCTGTATCCTGGGGACGTGGGGCTGTATCCAGGTGAAGATGGACTGTATCCAGGCGATGATGGA
CTATATCCAGGGGATGAAGTAGGTGAGAAAGCCATTCCCGTAACATAAGGAGAAAACTGAGCATCCGTAGAG