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Detailed information on CNT30705859


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 3e-58

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640872Prunus aviumNymphaea colorata74.8373.8482.29559forward
CNT30549166Prunus aviumIpomoea triloba42.4447.1782.02317forward
CNT30500604Prunus aviumCoffea canephora66.5380.8181.09497forward
CNT30267763Prunus aviumChenopodium quinoa52.0755.8180.46389forward
CNT3021339Prunus aviumCitrullus lanatus59.1769.7282.58442forward
CNT30727661Prunus aviumCorchorus capsularis64.2676.6882.5480forward
CNT30379091Prunus aviumManihot esculenta49.9363.2282.31373forward
CNT30628784Prunus aviumVigna unguiculata72.4271.0981.15541forward
CNT30195835Prunus aviumPisum sativum3410081.1254forward
CNT30489004Prunus aviumOlea europaea34.6742.1882.63259forward
CNT30710559Prunus aviumGlycine max63.7272.1281.51476forward
CNT3042435Prunus aviumPrunus dulcis72.1677.8995.92539forward
CNT3091337Prunus aviumSolanum tuberosum48.8644.7381.92365forward
CNT30304911Prunus aviumTriticum aestivum29.5936.9681221forward
CNT30592011Prunus aviumMusa acuminata47.2687.1680.74353forward
CNT30171519Prunus aviumTrifolium pratense1737.3587.4127forward
CNT30263629Prunus aviumBrassica rapa67.7488.3181.03506forward
CNT30140910Prunus aviumLolium perenne35.2173.6779.85263forward
CNT30607743Prunus aviumGossypium raimondii67.4774.6782.54504forward
CNT30648676Prunus aviumRosa chinensis74.1674.3684.12554forward
CNT30476941Prunus aviumArabidopsis halleri59.7155.6880.72446forward
CNT30366537Prunus aviumSorghum bicolor39.6333.9480.41296forward
CNT30154791Prunus aviumPrunus persica82.7379.5497.09618forward
CNT30408809Prunus aviumPapaver somniferum78.3167.7179.15585forward
CNT30642027Prunus aviumCannabis sativa82.7396.8782.04618forward
CNT3051605Prunus aviumAmborella trichopoda29.5933.3381221forward
CNT3023412Prunus aviumPopulus trichocarpa61.3181.0682.53458forward
CNT30121049Prunus aviumCitrus clementina81.6656.3883.44610forward
CNT30330871Prunus aviumDioscorea rotundata53.9555.7481.39403forward
CNT3049385Prunus aviumCucumis sativus70.5566.5485.01527forward

Expression of CNT30705859

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MPFLQHREKTGHLKWVTDEGLGSANNLETSCPHDMEFPTLENEMV

>peptide 2 (55 aa)
MVTFLDCLESMPTMDCIWLTEDCNLEMWGYSWEKLGCRMEMWGCRRATLGCRKAM*

>peptide 3 (64 aa)
MWDYMQVKSGCKQVMSGCKQVMLDCNLVKLDCNLEKWDCNLEKWDCNLEKWGYSWVRWVSMMDL*

Sequence

>CNT30705859
CTGTAATTTGGAGACGTAGGACTATATGGACTAGATGGTGACATTCTTGGACTGCTTGGAGAGTATGCCGACGATGGACTGTATTTGGCTGACTGAGGAT
TGTAACTTGGAGATGTGGGGCTATAGCTGGGAGAAGTTGGGCTGTAGGATGGAGATGTGGGGCTGTAGGAGGGCGACGTTGGGCTGTAGGAAGGCGATGT
AGGGCTGTAGGAAGGTGATGTGGGACTATATGCAGGTGAAGTCGGGCTGTAAGCAGGTGATGTCGGGCTGTAAGCAGGTGATGTTGGACTGTAACTTGGT
GAAGTTGGACTGTAACTTGGAGAAGTGGGACTGTAACTTGGAGAAGTGGGACTGTAACTTGGAGAAGTGGGGCTATAGCTGGGTGAGGTGGGTGAGTATG
ATGGACTTGTAGGAGAATAGGCCGGACTGGTTGGACTATAACCTGGAGAACTAGGACTATAGGTTGGAGAGGTGGGACTGTACCCAGGAGAAGTGGGGCT
GTACCCGGGCGAGGTGGGACTATAACCAGGGGATGTGGGACTGTATCCAGGGGAGGACGGACTGTAGCCAGGGGATGATGGGCTGTAGCCCGGAGATGAA
GTAGGAGAGAATGCCATTCCTCCAACATAGGGAGAAAACTGGGCATCTGAAATGGGTGACAGACGAAGGTTTGGGCTCAGCAAATAATTTGGAGACATCA
TGCCCTCATGATATGGAGTTCCCGACACTGGAGAACGAGATGGTGTC