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Detailed information on CNT30710467

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 4e-171

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30549166	Glycine max	Ipomoea triloba	69.99	75.3	79.45	506	forward
CNT30267763	Glycine max	Chenopodium quinoa	57.54	59.68	80.53	416	forward
CNT30379051	Glycine max	Manihot esculenta	45.09	46.7	81.29	326	forward
CNT30524942	Glycine max	Phaseolus vulgaris	94.88	102.24	84.99	686	forward
CNT30628784	Glycine max	Vigna unguiculata	102.21	97.11	85.39	739	forward
CNT3042435	Glycine max	Prunus dulcis	59.61	62.28	83.53	431	forward
CNT30591858	Glycine max	Musa acuminata	52.56	74.95	80.26	380	forward
CNT30508941	Glycine max	Solanum lycopersicum	39.28	71.54	82.75	284	forward
CNT30554721	Glycine max	Oryza glaberrima	42.74	33.05	82.2	309	forward
CNT30145737	Glycine max	Medicago truncatula	53.8	63.15	86.38	389	forward
CNT30311670	Glycine max	Camelina sativa	48.82	64.07	81.59	353	forward
CNT3062262	Glycine max	Arabidopsis lyrata	34.72	45.8	83.27	251	forward
CNT3079663	Glycine max	Brassica juncea	34.72	47.18	83.67	251	forward
CNT30141877	Glycine max	Lolium perenne	39.28	63.39	80.63	284	forward
CNT3016767	Glycine max	Zea mays	35.96	34.39	83.85	260	forward
CNT30607691	Glycine max	Gossypium raimondii	91.29	97.49	81.06	660	forward
CNT3067979	Glycine max	Leersia perrieri	41.49	83.33	81	300	forward
CNT30625547	Glycine max	Daucus carota	47.16	32.85	81.52	341	forward
CNT30366570	Glycine max	Sorghum bicolor	41.77	49.35	81.79	302	forward
CNT30596739	Glycine max	Oryza meridionalis	33.06	36.77	83.26	239	forward
CNT30354661	Glycine max	Lactuca sativa	35.82	46.58	81.08	259	forward
CNT30370935	Glycine max	Oryza glumipatula	27.25	20.35	83.76	197	forward
CNT30154742	Glycine max	Prunus persica	59.61	51.37	83.29	431	forward
CNT3027877	Glycine max	Theobroma cacao	53.8	98.48	80.21	389	forward
CNT30109704	Glycine max	Oryza longistaminata	25.59	33.27	82.7	185	forward
CNT3035176	Glycine max	Cucumis melo	27.66	36.36	84	200	forward
CNT30103004	Glycine max	Oryza rufipogon	28.49	20.66	83.98	206	forward
CNT30577473	Glycine max	Oryza barthii	33.06	43.85	82.85	239	forward
CNT30176441	Glycine max	Vigna angularis	53.8	64.3	89.72	389	forward
CNT3049544	Glycine max	Cucumis sativus	72.48	65.42	79.77	524	forward

Expression of CNT30710467

Peptides detected in this lncRNA

>peptide 1 (35 aa)
YSSVMWDYMDLMETISDCLENMLTKDYTLLTVDCN*

Sequence

>CNT30710467
CTATAGTTCGGTGATGTGGGACTATATGGACTTGATGGAGACAATCTCGGACTGCTTGGAGAATATGCTAACGAAGGACTATACTTTGCTGACTGTGGAT
TGTAACTAGGGGAAGTAGGGCTATACGATGGCGAGGTTGGGCTATATGAGGGTGAGGTTGGGCTGTATCCAGGCGATGTGGGGCTGTAAGCAGGTGATGT
AGGACTATATGATGGAGATGTTGGACTGTAAGAGGGTGATGTAGGGCTGTAGGAAGGTGAAGTTGGACTATAAGAAGGAGAAGTCGGACTATAGGAAGGA
GATGTGGGGCTGTAAGCTGGTGAAGTGGGGCTGTAAGCTGGTGAAGTGGGGCTGTAGCTGGGTGATGTAGGGCTGTAGCTGGGTGATGTAGGACTGTAGC
TGGGTGATGTGGGAGAGTAGGATGGACTGGTAGGCGAATAAGCTGGACTTGTAGGACTATATCCCGGAGAGCTAGGACTATAAGTCGGAGAGGTGGGACT
GTACCCAGGTGACGTGGGACTGTACCCGGGTGACGTGGGGCTGTATCCGGGTGAAGTGGGACTGTACCCGGGTGATGAGGGACTATAGCCTGGGGATGAT
GGGCTGTAACCAGGAGATGAAGTAGGAGAAAATGCCATCCCACCAACATAAGGTGAAAACTGTGCATCGCTAGTTGGAGAGAGCCGTAAATTTGGGCTCA
ACAAATAACTGGGAGACATCAAG