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Detailed information on CNT30591239


BLAST search results

BLAST vs Swiss-Prot:
sp|P27521|CA4_ARATH, E-value = 1e-40

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695577Musa acuminataOryza sativa66.0718.1986.49185forward
CNT30675752Musa acuminataSetaria viridis71.7934.688.06201forward
CNT30523687Musa acuminataSetaria italica60.7124.0587.65170forward
CNT30381598Musa acuminataManihot esculenta42.521.484.87119forward
CNT30708791Musa acuminataGlycine max52.520.0582.31147forward
CNT30300691Musa acuminataTriticum aestivum65.3620.4284.7183forward
CNT30394114Musa acuminataTriticum turgidum65.3655.2984.7183forward
CNT30564637Musa acuminataActinidia chinensis26.796.588875forward
CNT3084615Musa acuminataVigna radiata30.717.4583.7286forward
CNT30554723Musa acuminataOryza glaberrima42.868.7986.67120forward
CNT308181Musa acuminataZea mays55.3628.2387.1155forward
CNT30605371Musa acuminataGossypium raimondii6066.1482.14168forward
CNT30685421Musa acuminataTriticum urartu63.5774.7984.27178forward
CNT30339489Musa acuminataEragrostis tef96.4315.8784.44270forward
CNT30596737Musa acuminataOryza meridionalis27.512.6685.7177forward
CNT30358059Musa acuminataLactuca sativa37.149.7882.69104forward
CNT30370931Musa acuminataOryza glumipatula66.0710.7287.03185forward
CNT30573808Musa acuminataVitis vinifera26.7911.7986.6775forward
CNT3038035Musa acuminataCucumis melo68.2138.7482.2191forward
CNT30103133Musa acuminataOryza rufipogon66.0725.7787.03185forward
CNT30577305Musa acuminataOryza barthii37.1411.4388.46104forward
CNT30117373Musa acuminataOryza nivara66.0711.8287.03185forward
CNT30604463Musa acuminataOryza punctata54.6413.0488.89153forward

Expression of CNT30591239

Peptides detected in this lncRNA

>peptide 1 (92 aa)
EGVEDAPRVADLIGRQAVVLEDGVLEDAKYSALPASYHCGALMMPILVKTSGRSIPATPSMAQRPFTSSACTYHLRFSGSSASPRGSNPLSPG

Sequence

>CNT30591239
TGAGGGGGTTGAAGATGCCCCCAGGGTAGCCGACCTCATTGGGCGGCAGGCTGTAGTTCTTGAAGATGGGGTCCTGGAGGACGCGAAGTACTCGGCCTTG
CCGGCGTCGTACCACTGCGGCGCGTTGATGATGCCGATCTTGGTGAAGACCTCCGGCAGAAGCATCCCCGCTACCCCCAGCATGGCCCAGCGCCCGTTCA
CGAGCTCCGCCTGCACGTACCACCTGAGGTTCTCGGGGTCCTCCGCCAGCCCCAGAGGGTCGAATCCATTGTCGCCCGGC