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Detailed information on CNT3084615


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SQL2|CB24_PEA, E-value = 3e-107

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675792Vigna radiataSetaria viridis15.5125.6880.45179forward
CNT30523236Vigna radiataSetaria italica15.5173.0680.45179forward
CNT30513114Vigna radiataJuglans regia18.2873.0183.41211forward
CNT30270368Vigna radiataChenopodium quinoa21.2346.8582.04245forward
CNT30728535Vigna radiataCorchorus capsularis16.0353.6284.32185forward
CNT30381598Vigna radiataManihot esculenta32.5867.6385.37376forward
CNT30526306Vigna radiataPhaseolus vulgaris33.2840.9894.79384forward
CNT30631290Vigna radiataVigna unguiculata19.9371.2195.65230forward
CNT30487770Vigna radiataOlea europaea20.1951.6682.4233forward
CNT30708773Vigna radiataGlycine max36.466.8893.57420forward
CNT30564637Vigna radiataActinidia chinensis28.0828.4580.25324forward
CNT30591239Vigna radiataMusa acuminata7.4530.7183.7286forward
CNT30554639Vigna radiataOryza glaberrima7.5432.8387.3687forward
CNT30171733Vigna radiataTrifolium pratense20.023387.45231forward
CNT30144644Vigna radiataMedicago truncatula24.8775.7386.41287forward
CNT30138628Vigna radiataLolium perenne13.6933.5579.75158forward
CNT30605371Vigna radiataGossypium raimondii6.4129.1386.4974forward
CNT30205828Vigna radiataHelianthus annuus7.9723.991.392forward
CNT30626732Vigna radiataDaucus carota27.325.1682.54315forward
CNT30621375Vigna radiataCajanus cajan33.2875.2986.98384forward
CNT30358059Vigna radiataLactuca sativa23.5725.5981.25272forward
CNT30414433Vigna radiataPapaver somniferum27.1225.2483.71313forward
CNT30573808Vigna radiataVitis vinifera31.4657.0881.82363forward
CNT3038035Vigna radiataCucumis melo15.2535.784.66176forward
CNT30103189Vigna radiataOryza rufipogon5.225.8688.3360forward
CNT30117377Vigna radiataOryza nivara4.1623.5389.5848forward
CNT30723301Vigna radiataLupinus angustifolius28.3476.5881.04327forward

Expression of CNT3084615

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MLQEVVKCSFSLASKVGAKFKGLNTLPGYPVSCGGKLYCLKMGSWLTLPGFLMSCHLLIST*

>peptide 2 (79 aa)
MGQRDAARGCQMFLLLGLQSRCKVQGVEHTTRVSSLVWGQAVLLEDGILVDTARVLDVLPSSDLHIMEQDELNHKEGGR*

>peptide 3 (35 aa)
MPKSVSKFTHSGLHERETGFYHHVIRLKLSSHELC*

>peptide 4 (35 aa)
MKIEGSLQSCPNLSQNSPIQDYTRGKQAFIIMSLD*

Sequence

>CNT3084615
TTTCAGAAGTGTGAACAGACTTGTATATCATGCTATAGAGTTATGATATTCGATGTAGCGATCCAAGTTATAAATTAATTTTCTATAAAATCCGGAATTC
AATTTTACATACTTGGGAAATACTGTATTCGAGTTTTGATTTTGTTCTTAAAAAATATCATGCTTAGTTACTGATTAACTGACTTGGATCTAAACCACAA
TATAAAACCATCTCAGTTCCTCTGTACATGAAAATAGAAGGATCATTACAATCATGCCCAAATCTGTCTCAAAATTCACCCATTCAGGATTACACGAGAG
GGAAACAGGCTTTTATCATCATGTCATTAGATTAAAACTTAGTAGCCACGAATTGTGTTGATGATGGTGTTGTGCCATGGGTCAGAGAGATGCTGCAAGA
GGTTGTCAAATGTTCCTTCTCCTTGGCCTCCAAAGTAGGTGCAAAGTTCAAGGGGTTGAACACACTACCAGGGTATCCAGTCTCGTGTGGGGGCAAGCTG
TATTGCTTGAAGATGGGATCTTGGTTGACACTGCCAGGGTTCTTGATGTCTTGCCATCTTCTGATCTCCACATAATGGAACAGGATGAACTCAATCACAA
AGAGGGTGGAAGATGAAGCAAAGTACTCTGATTTCCCTGCATCATACCATTGAGGGGCATTGATGATTCCCAATTTGGTGAAAACCTCAGGAAGCAACAT
TCCTGCAACACCCAACATGGCCCAGCGTCCATTCACAAGCTCAGCTTGAACATACCACCTCAAATTCTCTGGGTCCTCAGCAAGCCCCAGAGGGTCAAAC
CCGTTGTCACCGGGAAGACTATCAGTATCACAAGAACACCAGTTAATAATTATGAATCCCTTTTCATCGGAGCAAAGAAGAATAGATACATAAAATTATA
CATCGCCAGTACTCACCTGCCATTAAGGTAAGCTGGGGAGGCCAAGCCTGGCAACCACTCTCCTTTCTTGGCTTCAACCTTGAAAGATGCAGAAGGAGGA
CACCCCATTGGCCTCATACTCACTTCCCGGTTCAGTTTCCCGGAAGACCCGGTCAGAAACCTAGATTTTGAGGCACATGGCCGGAAAATGGCGGCGGAGG
CTTGGGTGGTGACGGTGGCCATGCTGATGACAGTGGAAGAGAGATGGGAAAATA