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Detailed information on CNT30358059


BLAST search results

BLAST vs Swiss-Prot:
sp|P27522|CB13_SOLLC, E-value = 5e-14

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675800Lactuca sativaSetaria viridis18.7231.7980.9199forward
CNT30523687Lactuca sativaSetaria italica26.7240.1778.87284forward
CNT30513114Lactuca sativaJuglans regia9.6935.6488.35103forward
CNT30270368Lactuca sativaChenopodium quinoa22.7746.2781.82242forward
CNT30728535Lactuca sativaCorchorus capsularis10.6332.7585.84113forward
CNT30381598Lactuca sativaManihot esculenta25.5948.9281.99272forward
CNT30526306Lactuca sativaPhaseolus vulgaris25.5929.0379.78272forward
CNT30708791Lactuca sativaGlycine max26.0637.7980.87277forward
CNT30300292Lactuca sativaTriticum aestivum8.3734.6383.1589forward
CNT30564637Lactuca sativaActinidia chinensis23.5221.9582250forward
CNT30591239Lactuca sativaMusa acuminata9.7837.1482.69104forward
CNT3084615Lactuca sativaVigna radiata25.5923.5781.25272forward
CNT30171733Lactuca sativaTrifolium pratense14.492282.47154forward
CNT30144644Lactuca sativaMedicago truncatula2775.7380.49287forward
CNT30138628Lactuca sativaLolium perenne9.2220.8182.6598forward
CNT30208094Lactuca sativaHelianthus annuus18.2581.5188.14194forward
CNT30626732Lactuca sativaDaucus carota27.1923.0881.66289forward
CNT30573808Lactuca sativaVitis vinifera25.442.4580.74270forward
CNT30103189Lactuca sativaOryza rufipogon9.2242.2484.6998forward

Expression of CNT30358059

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MGAYPYLRWHIHKIYYVDVVGHKCLVGPSDCHVGRFFLVLLFGMF

>peptide 2 (83 aa)
MNSITNRVDDDAKYSDFPASYHLGTLSTPMLVKTSGSSIPATPNMAHLPFTSSAWTNHFRFSGSSAKPNGLNPVAIGLFWLRS*

Sequence

>CNT30358059
CAGCTACTTCGTCGAACATAGCCTAAATAACCGTTAAGCCGATTAAATTAAAAACAAACAGCCACTTATATAGCTTTTGCTGAAACTTACCTTTGTGAAT
TATGATAATGACAACAAGTTCAAATAAATCATAAATCACCATCTCATATTTTATATTCACAACACATGGTTTACAAATAAAGCAAAAGAAGATAGATACT
GTTTAGTTTCCTGAAAGTGTTTGGACAATAGTGTTATGCCATGGGTCCGAAAGGTGCTGCAATAGGTTGTAAACTGTAGCTTTTGAAGATCGGATCTTGG
TTTACACTTCCTGGGTTCTTGATGTCTTGCCATCTTCTGATTTCGACGTAGTGGAAAAGAATGAACTCGATCACCAACAGGGTTGATGATGATGCGAAGT
ATTCTGATTTTCCGGCGTCGTACCATTTAGGAACGTTGAGTACGCCGATGCTTGTGAAAACCTCCGGCAGTAGCATTCCGGCGACACCCAACATGGCCCA
CCTCCCGTTCACAAGCTCAGCTTGGACGAACCACTTCAGATTCTCCGGGTCCTCCGCTAAACCCAATGGGCTAAACCCGGTAGCCATTGGCCTTTTTTGG
CTTCGATCTTGAAGGAAGCAGATGAGAAAGTGTTTGCAGGTTTGAGTGATACTTCTCTGTTTAACTTCCCTGATGATCCTGTTAGGAACCTGGTTCGTGA
GGCGCATGGTCGGAAGACTGCGACCGGAGATTGTGTGACGGCGGCCATATTTTCCGGCAATGGAGTGGTGGTTTGTAGTTTGTAGAGGTGAGTGTGAGTT
GAAAATGTGTGATGTGGGTGCATCCTTTTGTAATATTGATTGAAGTGGTGATCTTGTGGCTGTGGTTTGGGGTTTGATGATTTAGTAGATTTTGAGGGAA
ATGCTGGGAAACTGACCAATGAGAAGCAATGGGTGCTTATCCTTATCTGAGGTGGCATATCCACAAAATCTATTACGTTGATGTTGTTGGTCACAAGTGT
CTTGTGGGGCCCTCTGATTGCCATGTAGGAAGATTTTTCTTGGTCTTGCTATTTGGTATGTTT