Detailed information on CNT30708791


BLAST search results

BLAST vs Swiss-Prot:
sp|P27521|CA4_ARATH, E-value = 1e-79

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30270368Glycine maxChenopodium quinoa33.5647.0484.96246forward
CNT30526306Glycine maxPhaseolus vulgaris48.9838.3193.04359forward
CNT30564637Glycine maxActinidia chinensis39.2925.2981.6288forward
CNT30591239Glycine maxMusa acuminata20.0552.582.31147forward
CNT30144644Glycine maxMedicago truncatula40.6578.6385.57298forward
CNT30626732Glycine maxDaucus carota37.2421.8185.71273forward
CNT30358059Glycine maxLactuca sativa37.7926.0680.87277forward
CNT30414433Glycine maxPapaver somniferum39.9723.6381.57293forward
CNT3038035Glycine maxCucumis melo22.132.8685.19162forward

Expression of CNT30708791

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MKIDGSQQSRPNHSQNSSIQDYTRRTQAYPCHWIQT*

>peptide 2 (60 aa)
MSLDTNLVATNCIDDGAKFKGLNTLPGYPHSCGGKLYCLKMGSWLTQPGFLMSCHLRIST*

>peptide 3 (39 aa)
MDHNNHAQITLKIHPFRITREGHRLIHVIGYKLSSHELY*

>peptide 4 (41 aa)
MWGQAVLLEDGVLVDTARVLDVLPSSDLDVVEQDELDHEEG*

Sequence

>CNT30708791
GTTGTATTAGAATTTTGATGAAATTTTTAGAAAGTATCATGCTTGATTACTGATTGATGGACAGTCTAAATAACAATATAAAACCATCGTAGTTCCTCTG
TACATGAAAATAGATGGATCACAACAATCACGCCCAAATCACTCTCAAAATTCATCCATTCAGGATTACACGAGAAGGACACAGGCTTATCCATGTCATT
GGATACAAACTTAGTAGCCACGAATTGTATTGATGATGGTGCAAAGTTCAAGGGGTTGAACACACTACCAGGGTATCCACACTCATGTGGGGGCAAGCTG
TATTGCTTGAAGATGGGGTCTTGGTTGACACAGCCAGGGTTCTTGATGTCCTGCCATCTTCGGATCTCGACGTAGTGGAACAAGATGAACTCGATCACGA
AGAGGGTTGAGGAAGATGCAAAGTACTCTGATTTCCCAGCATCATACCATTGAGGGGCATTGATGATTCCAAACTTGGTGAAAACCTCAGGAAGCAACAT
TCCTGCAACACCCAACATGGCCCAACGTCCATTCACAAGCTCGGCTTGAACGTACCACCTCAAGTTCTCTGGGTCCTCAGCTAGCCCCAGAGGGTCAAAT
CCATTGAGGGCACCCCATTGGCCGCCTCGATTTCGAGGTACATGGCCGGAAAATTGCGGCGGAGGCTTGGGTGGTGACGGTGGCCATGGCGGCGACACAC
GGGCAGTGACAAGGAAGATATGAAGAAAACAAT