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Detailed information on CNT30394114


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30300691Triticum turgidumTriticum aestivum71.326.3496.61236forward
CNT30591239Triticum turgidumMusa acuminata55.2965.3684.7183forward
CNT30685421Triticum turgidumTriticum urartu71.910097.06238forward
CNT30339489Triticum turgidumEragrostis tef50.769.8891.67168forward
CNT30577305Triticum turgidumOryza barthii31.7211.5495.24105forward

Expression of CNT30394114

Peptides detected in this lncRNA

>peptide 1 (45 aa)
LNEWKNIQRLTGAVRLEINDGEASRGAMDVPLASSFSLFSRVGAK*

Sequence

>CNT30394114
CCCTGAACGAATGGAAAAACATCCAAAGATTAACAGGAGCCGTCCGATTAGAAATTAACGACGGTGAAGCAAGCAGAGGAGCGATGGACGTACCGTTGGC
GAGCTCCTTCTCCTTGTTCTCGAGGGTGGGGGCGAAGTAGGTCTCCTTGCCGGCGTCGTACCACTCGGGCGCGTTCAGCAGCCCCGCCTTGGTCAGCACC
TCCGGGATCAGCATCCCCGCCACCCCCAGCATCGCCCACCGCCCGTTCACCAGCTCCGCCTGCACGAACCACCGCAGGTCCTCCGGGTCCTCCGCCAGCG
CCAGCGGGTCGAATCCATTGTCACCCGCCAA