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Detailed information on CNT30442485


BLAST search results

BLAST vs Swiss-Prot:
sp|P21569|CYPH_MAIZE, E-value = 1e-65

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691021Aegilops tauschiiOryza sativa19.8450.7487.21172forward
CNT30671343Aegilops tauschiiSetaria viridis27.140.8788.94235forward
CNT30517653Aegilops tauschiiJuglans regia25.7211.6583.41223forward
CNT30702610Aegilops tauschiiQuercus lobata29.9949.8182.31260forward
CNT30618033Aegilops tauschiiSesamum indicum22.0323.6481.68191forward
CNT3071229Aegilops tauschiiQuercus suber33.6839.5783.56292forward
CNT30632225Aegilops tauschiiVigna unguiculata17.8831.9685.81155forward
CNT30710754Aegilops tauschiiGlycine max28.499583.4247forward
CNT3043301Aegilops tauschiiPrunus dulcis20.0724.485.06174forward
CNT30167177Aegilops tauschiiPistacia vera21.1125.6383.06183forward
CNT30194493Aegilops tauschiiSecale cereale25.3731.9898.64220forward
CNT30303130Aegilops tauschiiTriticum aestivum30.3381.6897.72263forward
CNT3084160Aegilops tauschiiVigna radiata20.0720.2685.06174forward
CNT30254078Aegilops tauschiiAvena sativa33.5646.1291.75291forward
CNT30597524Aegilops tauschiiFraxinus excelsior5.7723.589050forward
CNT30140197Aegilops tauschiiLolium perenne45.5649.4485.57395forward
CNT3010238Aegilops tauschiiZea mays40.1435.2290.52348forward
CNT30653963Aegilops tauschiiRosa chinensis38.5240.1483.23334forward
CNT30624974Aegilops tauschiiDaucus carota19.1522.887.35166forward
CNT30686383Aegilops tauschiiTriticum urartu45.6752.5998.99396forward
CNT30364404Aegilops tauschiiSorghum bicolor28.0334.8188.89243forward
CNT30706413Aegilops tauschiiPrunus avium16.6143.6482.64144forward
CNT30100563Aegilops tauschiiOryza rufipogon33.7931.3785.32293forward
CNT30175854Aegilops tauschiiVigna angularis20.0752.185.63174forward

Expression of CNT30442485

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MDSPPVPLPRVKSPPWHMKSGITRWKALPL*

>peptide 2 (40 aa)
TEIEGITPEKAHGYQHIGVRSTRQSMNATNRYEAKRTNNG*

>peptide 3 (32 aa)
HRNRGDNTRKSTRVPTHWSQEHQTKYECDKQI*

>peptide 4 (79 aa)
MTTCLEQVPLREPTFSMFLTTSMPSTTSPKTTCLPSSQLQGTVQMKNWEPLVLGPALAMERIPGLVCLWTNFSSANFSP*

Sequence

>CNT30442485
CACAGAAATCGAGGGGATAACACCAGAAAAAGCACACGGGTACCAACACATTGGAGTCAGGAGCACCAGACAAAGTATGAATGCGACAAACAGATATGAA
GCCAAGCGCACAAATAATGGATAATTCATAGCGGAGTTCATCTCATTCAAACGGTAAGATAGCAGCAGACACAGGAAGATAACCAAGGCGGCCGGACAGA
GATCCGGCAGCCCAAAGAGTCCACCTAAAACCCTCCTAAACCAACCACGGAGATCTCATCGGACGGACCAGGGGAAGACACGACACGACACACGACTCTC
TTATTGATCGACGACACGACACGGGACACACGGGGCGGCGACGACGACGGCGAAAGGCGACCCGCGCGCGGGCGGATCTAGAGCTGGCCGCAGTCGGCGA
TGACCACCTGCTTGGAGCAGGTGCCGCTGCGGGAGCCCACCTTCTCGATGTTCTTGACGACGTCCATGCCCTCGACGACCTCGCCGAAGACCACGTGCTT
GCCGTCGAGCCAATTGCAGGGGACGGTGCAGATGAAGAACTGGGAGCCGTTGGTGTTGGGCCCCGCGTTGGCCATGGAGAGGATCCCGGGCTTGGTGTGC
TTGTGGACGAACTTCTCGTCGGCGAACTTCTCGCCGTAGATGGACTCGCCGCCGGTGCCGTTGCCCCGGGTGAAGTCGCCGCCCTGGCACATGAAGTCGG
GGATCACGCGGTGGAAGGCGCTGCCCTTGTAGTGCAGCGGCTTGCCGCTCTTGCCGACGCCCTTCTCGCCGAACACCCTCGGGTTGGCCATCTCGCTCGC
CGGGATCGGGGATGAGGGCTAGGGTTTTGAGATGGGGATTTCTGTGGGGATTGGGATTACCTTTCGC