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Detailed information on CNT30167177


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39613|CYPH_CATRO, E-value = 3e-106

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517653Pistacia veraJuglans regia52.3819.5483.96374forward
CNT30702610Pistacia veraQuercus lobata48.1865.987.21344forward
CNT30376622Pistacia veraArabidopsis thaliana42.7238.2279.34305forward
CNT30618033Pistacia veraSesamum indicum51.5445.5480.43368forward
CNT3019668Pistacia veraCitrullus lanatus17.0928.7789.34122forward
CNT3071229Pistacia veraQuercus suber48.7447.1588.51348forward
CNT30632225Pistacia veraVigna unguiculata43.8464.5484.03313forward
CNT30201798Pistacia veraPisum sativum21.2965.2482.24152forward
CNT30710754Pistacia veraGlycine max34.3194.2388.16245forward
CNT3043301Pistacia veraPrunus dulcis41.8841.9485.28299forward
CNT3090362Pistacia veraSolanum tuberosum33.6150.3185240forward
CNT30303130Pistacia veraTriticum aestivum25.4956.5282.97182forward
CNT3084160Pistacia veraVigna radiata41.0434.1186.01293forward
CNT30442485Pistacia veraAegilops tauschii25.6321.1183.06183forward
CNT30240409Pistacia veraAvena sativa42.1641.6383.72301forward
CNT30667711Pistacia veraTriticum dicoccoides36.5538.581.61261forward
CNT30312502Pistacia veraCamelina sativa32.6365.8280.26233forward
CNT30140197Pistacia veraLolium perenne43.4238.884.52310forward
CNT3010238Pistacia veraZea mays51.1236.9480365forward
CNT30653963Pistacia veraRosa chinensis69.6159.7487.12497forward
CNT30686175Pistacia veraTriticum urartu36.4133.9981.15260forward
CNT30364404Pistacia veraSorghum bicolor26.7527.3681.15191forward
CNT30429993Pistacia veraPapaver somniferum22.1315.6781.65158forward
CNT30706413Pistacia veraPrunus avium18.0739.0992.25129forward
CNT3022997Pistacia veraPopulus trichocarpa37.6850.9583.64269forward
CNT30100456Pistacia veraOryza rufipogon10.6423.185.5376forward
CNT30175854Pistacia veraVigna angularis28.5761.0884.8204forward

Expression of CNT30167177

Peptides detected in this lncRNA

>peptide 1 (39 aa)
LRNTHEKLETPTSYFKHTQSVMIDYNMIMIIIIIEIYDL*

>peptide 2 (30 aa)
MVMSKNTLGLAMLQTNKETQKKLIRFVQCCF

Sequence

>CNT30167177
CCTAAGAAATACACATGAGAAACTAGAGACACCCACATCATATTTTAAACATACTCAGTCCGTCATGATCGACTATAACATGATCATGATCATTATCATT
ATCGAAATCTACGATTTATAACATTTTTTTTAAATCTAAGACAATTGACCGCAGTCAGCAACCACAACGGGCTTCGAAGTCCTGCCGGAGCTGGACCCCA
CTTTCTCAATGGCCTTCACGACGTCCAGACCCTCAACCACCTGACCAAACACCACGTGCTTTCCGTCGAGCCACTCGGTCTTAGCGGTACAGACAAAGAA
CTGAGACCCGTTGGTTCCGGGTCCGGCATTGGCCATGGAGAGGATACCGGGTCCTGTGTGCTTCTTGACGAAGTTCTCGTCGGCGAACTTGGCGCCGTAG
ATTGATTCACCTCCTGTGCCGTTTCCGGCAGTGAAGTCGCCTCCCTGGCACATGAAGCCGGGGATCACGCGATGGAAGCTTGATCCTTTGTAGTGGAGTG
GCTTGCCGGAGCGACCGACGCCTTTCTCGCCAGTGCAGAGAGCTCGGAAGTTCTCGGCGGTGCGAGGAGTGGTGTCCTGGAAGAGCTCCATCACGATCCT
TCCGGCCGGCTGACCGCCGATGGTCATGTCAAAAAACACCTTAGGGTTAGCCATGTTACAAACCAACAAAGAGACACAGAAAAAATTGATTAGATTTGTG
CAGTGTTGTTTCGA