« Back to Brachypodium distachyon search


Detailed information on CNT30147796


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672312Brachypodium distachyonSetaria viridis39.834.2789.24158forward
CNT30375654Brachypodium distachyonArabidopsis thaliana23.1719.0182.6192forward
CNT30500595Brachypodium distachyonCoffea canephora22.1711.5685.2388forward
CNT30282946Brachypodium distachyonChenopodium quinoa20.658.0686.5982forward
CNT30526506Brachypodium distachyonPhaseolus vulgaris20.656.9286.5982forward
CNT30290500Brachypodium distachyonTriticum aestivum35.0126.9494.96139forward
CNT30386996Brachypodium distachyonTriticum turgidum35.0125.6994.24139forward
CNT30587569Brachypodium distachyonMusa acuminata22.1726.2792.0588forward
CNT30554457Brachypodium distachyonOryza glaberrima39.813.1693.67158forward
CNT30436840Brachypodium distachyonAegilops tauschii35.0134.3294.96139forward
CNT30244633Brachypodium distachyonAvena sativa37.7827.7392150forward
CNT30659570Brachypodium distachyonTriticum dicoccoides33.7524.4594.03134forward
CNT30680980Brachypodium distachyonTriticum urartu35.0126.5394.96139forward
CNT30338967Brachypodium distachyonEragrostis tef39.832.3889.24158forward
CNT30370789Brachypodium distachyonOryza glumipatula39.811.4893.67158forward
CNT30328621Brachypodium distachyonAsparagus officinalis20.6527.5287.882forward
CNT30102749Brachypodium distachyonOryza rufipogon34.2619.692.65136forward
CNT30580758Brachypodium distachyonEchinochloa crusgalli41.0632.0995.71163forward
CNT30116951Brachypodium distachyonOryza nivara39.810.6893.04158forward
CNT30556512Brachypodium distachyonPanicum hallii36.5229.990.34145forward

Expression of CNT30147796

Sequence

>CNT30147796
TTCATATATTACACAAATCACCAAAGTCATCCCAGCAGCTCTCCTAAGTAACCAGACCTGCGTTTAACCAACAAAGTATCGTCCATCTTCGTGCCCTCTC
ACCGCTCATCACAAAACTAAACCAGCCACACGTTCGTTCGTAGTACACGAACTCGTCGGTCCATTTCGCAGCTGAGCTGACAGAAAAAACGTGTACACTG
TTGAAACGACCCATAGGACTAGGTCTAGGAGCCCAAGGTGTCGAAGATGGACCCGCCCGGGTACAGCCTCTTCTCCGGGTCCAGCTCCGCGTTCCTCTGG
AACTCGATGTAGCCGATCACCAGCACCTCGATCCAGATCAGCGTCGTGATCGTGAACGGCAGCGGCTGCCCCAGGTACGACGACCCGTCCACCAGCT