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Detailed information on CNT30144899


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9S7W1|CB4C_ARATH, E-value = 7e-51

BLAST vs NONCODE:
NONPOPT001930, E-value = 3e-26

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513329Medicago truncatulaJuglans regia27.418.2282.91117forward
CNT30500595Medicago truncatulaCoffea canephora20.1411.384.8886forward
CNT30282946Medicago truncatulaChenopodium quinoa26.2311.0182.14112forward
CNT30478099Medicago truncatulaArabidopsis halleri24.3614.7181.73104forward
CNT30620951Medicago truncatulaCajanus cajan26.2310.7786.61112forward

Expression of CNT30144899

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MSLVEGSNETNRSFSCNSSLNCKDEENHHGQTRMLNLCQLKSFFLFRITGQTKRIKELSTWV*

Sequence

>CNT30144899
CACACACATAATCAGTTTTTAACTTCTGCAGAAGAAAAATAAATTAACTAAATTTAAAGATGGAGTAATTAGTGACACATAGTATTGAAGATTGAGATAA
AAGGGCTTCACATGTTATGTCACTGGTTGAAGGTAGCAATGAAACCAATAGGTCCTTTTCCTGTAACAGCAGCTTGAATTGCAAAGATGAGGAAAACCAC
CATGGCCAAACGAGAATGCTTAATCTCTGCCAATTGAAGTCTTTCTTTCTCTTCAGGATCACTGGCCAAACCAAGAGGATCAAAGAACTTTCCACCTGGG
TATAACCTTTTCTCTGGGTCAAGCTCTGCATTCCTTTGAAACTCAATGTAGCCAATTACTAATACTTCAATCCATATCAATGTGCTAATTGAGAATGGAA
GAGAAAATCCAAAGTAGGATGATCCTT