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Detailed information on CNT30628902


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 3e-112

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30700558Vigna unguiculataQuercus lobata60.0598.5281.95266forward
CNT30378927Vigna unguiculataManihot esculenta91.4265.4381.48405forward
CNT3091361Vigna unguiculataSolanum tuberosum75.8545.7182.44336forward
CNT30400472Vigna unguiculataTriticum turgidum29.5713.1485.5131forward
CNT30559890Vigna unguiculataActinidia chinensis48.5331.4884.65215forward
CNT30591858Vigna unguiculataMusa acuminata88.4977.3279.34392forward
CNT3088002Vigna unguiculataVigna radiata99.182.8392.26439forward
CNT30145737Vigna unguiculataMedicago truncatula98.1970.6286.44435forward
CNT30442780Vigna unguiculataAegilops tauschii29.5716.5286.26131forward
CNT30141877Vigna unguiculataLolium perenne65.0164.2980.21288forward
CNT30608057Vigna unguiculataGossypium raimondii97.2972.6881.44431forward
CNT30205386Vigna unguiculataHelianthus annuus52.632.5981.55233forward
CNT30350936Vigna unguiculataEragrostis tef64.7963.0881.53287forward
CNT30476914Vigna unguiculataArabidopsis halleri61.448.5781.99272forward
CNT30596736Vigna unguiculataOryza meridionalis60.0535.2381.2266forward
CNT30354818Vigna unguiculataLactuca sativa27.5423.3386.89122forward
CNT30370935Vigna unguiculataOryza glumipatula67.4930.8980.6299forward
CNT30410012Vigna unguiculataPapaver somniferum44.4751.8481.22197forward
CNT30574023Vigna unguiculataVitis vinifera54.8543.7182.3243forward
CNT3027877Vigna unguiculataTheobroma cacao85.7896.281.58380forward
CNT3035176Vigna unguiculataCucumis melo62.085079.64275forward
CNT30103220Vigna unguiculataOryza rufipogon64.1130.5780.28284forward
CNT30584594Vigna unguiculataEchinochloa crusgalli66.3747.5782.99294forward
CNT30497905Vigna unguiculataDigitaria exilis78.3338.4380.4347forward
CNT30335475Vigna unguiculataCynara cardunculus54.6318.6380.99242forward

Expression of CNT30628902

Peptides detected in this lncRNA

>peptide 1 (38 aa)
CSLGMWDYMDLMETILDCLENMPMKDCTLLTGDCNLGK*

>peptide 2 (39 aa)
MQVKWGYRQVKWDCMQVKSGCSWEKLGYNWVMWGCSWVM*

Sequence

>CNT30628902
TGTAGTTTGGGGATGTGGGACTATATGGACTTGATGGAGACAATCTTGGACTGCTTGGAGAATATGCCAATGAAGGACTGTACTTTGCTGACTGGGGATT
GTAACTTGGGGAAGTAGGACTATACGATGGGGATGTTGGGCTATATGAGGGTGACGTAGGGCTGTATCCAGGTGAAGTGGGGCTGTAAGCAGGGGATGCA
GGGCTATATGATGGGGAGGTAGGGCTGTAAGAGGGTGAAGTGGGGCTGTATGAAGGTGACGTAGGGCTGTAGGAAGGTGAAGTGGGACTATATGCAGGTG
AAGTGGGGCTATAGGCAGGTGAAGTGGGACTGTATGCAGGTGAAGTCGGGCTGTAGCTGGGAGAAGTTGGGCTATAACTGGGTGATGTGGGGCTGTAGCT
GGGTGATGTAGGACTGTAGCTGGGTGATGTTGGGCTATAGCTG