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Detailed information on CNT30145737


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640872Medicago truncatulaNymphaea colorata36.3629.5981.25224forward
CNT30536082Medicago truncatulaEucalyptus grandis66.469.0979.71409forward
CNT30315993Medicago truncatulaCorylus avellana5030.7183.77308forward
CNT30549166Medicago truncatulaIpomoea triloba29.8727.3884.24184forward
CNT30516792Medicago truncatulaJuglans regia72.450.1181.61446forward
CNT30700805Medicago truncatulaQuercus lobata43.0287.4680.75265forward
CNT30376525Medicago truncatulaArabidopsis thaliana59.2547.7181.37365forward
CNT30616482Medicago truncatulaSesamum indicum50.4920.3981.35311forward
CNT30269263Medicago truncatulaChenopodium quinoa53.4143.1881.46329forward
CNT3021339Medicago truncatulaCitrullus lanatus46.5945.2780.84287forward
CNT30727660Medicago truncatulaCorchorus capsularis68.5177.1581.04422forward
CNT30378927Medicago truncatulaManihot esculenta60.7160.4280.75374forward
CNT30524942Medicago truncatulaPhaseolus vulgaris70.1364.3886.57432forward
CNT30628902Medicago truncatulaVigna unguiculata70.6298.1986.44435forward
CNT30195835Medicago truncatulaPisum sativum23.2156.390.91143forward
CNT30490956Medicago truncatulaOlea europaea47.0869.0581.38290forward
CNT30506120Medicago truncatulaNicotiana attenuata55.3658.2981.82341forward
CNT30710467Medicago truncatulaGlycine max63.1553.886.38389forward
CNT3042435Medicago truncatulaPrunus dulcis45.1340.1781.29278forward
CNT3091554Medicago truncatulaSolanum tuberosum54.8749.1382.84338forward
CNT30304911Medicago truncatulaTriticum aestivum42.2143.4881.15260forward
CNT30400271Medicago truncatulaTriticum turgidum53.967.0780.12332forward
CNT30559890Medicago truncatulaActinidia chinensis49.0344.2282.12302forward
CNT30591858Medicago truncatulaMusa acuminata32.9540.0482.27203forward
CNT3088002Medicago truncatulaVigna radiata72.8984.7282.63449forward
CNT30234460Medicago truncatulaBrassica oleracea49.1943.181.85303forward
CNT30508904Medicago truncatulaSolanum lycopersicum54.3854.2182.39335forward
CNT30554580Medicago truncatulaOryza glaberrima45.6241.3281.85281forward
CNT30171519Medicago truncatulaTrifolium pratense39.2971.1888.84242forward
CNT30442780Medicago truncatulaAegilops tauschii50.8139.4780.51313forward
CNT30256659Medicago truncatulaAvena sativa5043.0879.55308forward
CNT30311656Medicago truncatulaCamelina sativa71.178.9280.59438forward
CNT3062262Medicago truncatulaArabidopsis lyrata39.7744.7182.04245forward
CNT3079663Medicago truncatulaBrassica juncea48.5456.281.94299forward
CNT30263848Medicago truncatulaBrassica rapa40.7559.3483.67251forward
CNT30468540Medicago truncatulaSaccharum spontaneum36.8526.2181.5227forward
CNT30141877Medicago truncatulaLolium perenne42.6958.7180.61263forward
CNT3017147Medicago truncatulaZea mays47.0840.5683.45290forward
CNT30607989Medicago truncatulaGossypium raimondii66.5658.7480.24410forward
CNT30216750Medicago truncatulaKalanchoe fedtschenkoi25.6532.2484.18158forward
CNT3067979Medicago truncatulaLeersia perrieri23.740.5685.62146forward
CNT30648676Medicago truncatulaRosa chinensis38.3131.6883.05236forward
CNT30205386Medicago truncatulaHelianthus annuus63.854.9778.63393forward
CNT30713436Medicago truncatulaMalus domestica golden32.9563.0482.76203forward
CNT30688162Medicago truncatulaTriticum urartu50.4946.2881.03311forward
CNT30341749Medicago truncatulaEragrostis tef42.6959.183.65263forward
CNT30476941Medicago truncatulaArabidopsis halleri39.7730.5981.63245forward
CNT30366857Medicago truncatulaSorghum bicolor50.4931.6780.71311forward
CNT30620207Medicago truncatulaCajanus cajan23.386.789.58144forward
CNT30596736Medicago truncatulaOryza meridionalis45.6237.2282.21281forward
CNT30354603Medicago truncatulaLactuca sativa43.9940.0380.81271forward
CNT30370935Medicago truncatulaOryza glumipatula45.6229.0381.85281forward
CNT30154777Medicago truncatulaPrunus persica69.8153.7580.23430forward
CNT30408809Medicago truncatulaPapaver somniferum46.132.8780.28284forward
CNT30574023Medicago truncatulaVitis vinifera62.1868.8880.94383forward
CNT30705868Medicago truncatulaPrunus avium45.1326.1881.29278forward
CNT30642025Medicago truncatulaCannabis sativa61.5373.8879.16379forward
CNT3027877Medicago truncatulaTheobroma cacao53.984.0582.23332forward
CNT3051546Medicago truncatulaAmborella trichopoda39.125080.91241forward
CNT30109704Medicago truncatulaOryza longistaminata36.0439.9381.98222forward
CNT30121063Medicago truncatulaCitrus clementina57.4773.982.2354forward
CNT3035176Medicago truncatulaCucumis melo42.6947.8282.13263forward
CNT30330867Medicago truncatulaDioscorea rotundata40.7534.7281.67251forward
CNT30149986Medicago truncatulaBrachypodium distachyon5034.3480.19308forward
CNT30103220Medicago truncatulaOryza rufipogon55.8437.0380.81344forward
CNT30577473Medicago truncatulaOryza barthii42.3747.8981.61261forward
CNT30584450Medicago truncatulaEchinochloa crusgalli50.4941.5282.96311forward
CNT30498009Medicago truncatulaDigitaria exilis55.8435.1481.4344forward
CNT30176441Medicago truncatulaVigna angularis66.5667.7784.88410forward
CNT30558075Medicago truncatulaPanicum hallii43.1833.7181.58266forward
CNT30551544Medicago truncatulaOryza brachyantha55.8449.579.94344forward
CNT3049385Medicago truncatulaCucumis sativus50.4939.2781.67311forward

Expression of CNT30145737

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MREMSGCKRVMWGCRKAKLDCRKVMLDYMMEKWDYRQVKWGCMLEMLGCMQVKWGYSWEM*

>peptide 2 (37 aa)
MWGCTQGMWDCTLVKWGCIQVMMDCSLVMMDCNQEMK*

Sequence

>CNT30145737
GTAGCTTGGAGACGTGGGACTATAGGGACTTGATGGAGACAACCTCGGACTGCTGGGAGAATATGCCAATGAAGGGCTATACTTAGCAGACTGCGGATTG
TAACTTGGGGAAGTAGGACTATATGATGGTGATGTTGGGCTGTAAGAGGGTGATGTGGGGCTGTACCCAGGAGAGGTAGGGCTGTAAGCAGGTGATGTAG
GGCTATATGAGGGAGATGTCGGGCTGTAAGAGGGTGATGTGGGGCTGTAGGAAGGCGAAGTTGGACTGTAGGAAGGTGATGTTGGACTATATGATGGAGA
AGTGGGACTATAGGCAGGTGAAGTGGGGCTGTATGCTGGAGATGTTGGGCTGTATGCAGGTGAAGTGGGGCTATAGCTGGGAGATGTAGGGCTGTAGCTG
GGAGAAGTTGGGCTGTAGCTGGGTGATGTGGGGCTGTACCCAGGGGATGTGGGACTGTACCCTGGTGAAGTGGGGCTGTATCCAGGTGATGATGGACTGT
AGCCTGGTGATGATGGACTGTAACCAGGAGATGAAGTAGGCGAAAATGCCATACCACCAACATATGGTGAAAACTGTGCATCGTTGCTAGGAGACAGCCG
GAGATTTGGGCTCAAC