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Detailed information on CNT3091361


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT000794, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30536082Solanum tuberosumEucalyptus grandis43.6754.2279.44321forward
CNT30727660Solanum tuberosumCorchorus capsularis45.5861.2480335forward
CNT30378927Solanum tuberosumManihot esculenta45.5854.1282.69335forward
CNT30628902Solanum tuberosumVigna unguiculata45.7175.8582.44336forward
CNT30490956Solanum tuberosumOlea europaea48.0384.0580.74353forward
CNT30591924Solanum tuberosumMusa acuminata35.7849.3480.23263forward
CNT30256659Solanum tuberosumAvena sativa29.6630.4983.03218forward
CNT30312353Solanum tuberosumCamelina sativa35.3763.4183.08260forward
CNT30141877Solanum tuberosumLolium perenne31.752.0180.69233forward
CNT3067979Solanum tuberosumLeersia perrieri31.764.7280.69233forward
CNT30205370Solanum tuberosumHelianthus annuus49.6655.980.27365forward
CNT30620243Solanum tuberosumCajanus cajan34.9777.4180.93257forward
CNT30596739Solanum tuberosumOryza meridionalis37.4142.3181.45275forward
CNT30354661Solanum tuberosumLactuca sativa36.648.3880.3269forward
CNT30410012Solanum tuberosumPapaver somniferum41.580.2680.98305forward

Expression of CNT3091361

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MLDYNWVMWVSMKDWLENMLDLSGCNQGMMGCNQGMMDCNQGMK*

>peptide 2 (53 aa)
MQEKLDYMMEKSDYKRVRWGYMKVKWGCKMAKWGCMPEKWGCRPEKWGCMPEK*

Sequence

>CNT3091361
TGTAACTTGGAGATGACGGGCTGTATGGACTAGAAGGAGACAGCTTCGGGCTGGTTGGCGAATATGCAAGGGAGGGGCTGTATCTCGCCGAGGGATTGTA
ACTTGGTGATGTAGGACTGTAGGATGGTGATGTTGGGCTATAGCTGGGAGATGTTGGGCTGTAACCAGGGGAGGTAGGACTGTATGCAGGAGAAGTTGGA
CTATATGATGGAGAAGTCGGACTATAAGAGGGTGAGGTGGGGCTATATGAAGGTGAAGTGGGGCTGTAAGATGGCGAAGTGGGGCTGTATGCCGGAGAAG
TGGGGCTGTAGGCCGGAGAAGTGGGGCTGTATGCCGGAGAAGTAGGGCTGTAGCTAGGTGATGTTGGGCTATAGCTAGGCGAGGTTGGGCTATAGCTTGG
AGATGTTGGACTATAACTGGGTGATGTGGGTGAGTATGAAGGACTGGTTGGAGAATATGCTGGACTTGTCGGGCTGTAACCAGGGGATGATGGGCTGTAA
CCAGGGGATGATGGACTGTAACCAGGGGATGAAGTAGGAGAGAAAGCCATGCCACCCACATAAGGAGAAAATTGAGCATCTGTAATCGGTGACATCCGCA
TATTTGGGCTGAGCAAATAATTTGGAGACATCATTCCATCATGATACGGGGTTCCACTGATAGGTGAACGCCCAGGTGTCATGCCAAATTCAAGACCACC
TTCCATGTAGCTAGGTAATGGTATCTCAATAGCTT