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Detailed information on CNT30620951


BLAST search results

BLAST vs Swiss-Prot:
sp|P08222|CB22_CUCSA, E-value = 2e-13

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672312Cajanus cajanSetaria viridis13.9431.4581.38145forward
CNT30520407Cajanus cajanSetaria italica12.620.9685.5131forward
CNT30640430Cajanus cajanNymphaea colorata13.6530.9486.62142forward
CNT30375654Cajanus cajanArabidopsis thaliana14.2330.5879.73148forward
CNT30502928Cajanus cajanNicotiana attenuata12.0235.4184.8125forward
CNT30708123Cajanus cajanGlycine max34.927.1787.88363forward
CNT30289158Cajanus cajanTriticum aestivum14.5252.0782.12151forward
CNT30221234Cajanus cajanHordeum vulgare13.9424.2180.69145forward
CNT30386996Cajanus cajanTriticum turgidum14.2327.3681.76148forward
CNT30587569Cajanus cajanMusa acuminata10.9634.0386.84114forward
CNT30144899Cajanus cajanMedicago truncatula10.7726.2386.61112forward
CNT30436840Cajanus cajanAegilops tauschii14.3336.7981.21149forward
CNT30450549Cajanus cajanSaccharum spontaneum7.420.8185.7177forward
CNT30132399Cajanus cajanLolium perenne7.2125.4286.6775forward
CNT3067780Cajanus cajanLeersia perrieri9.921.5587.38103forward
CNT30680980Cajanus cajanTriticum urartu14.5228.8281.46151forward
CNT30338963Cajanus cajanEragrostis tef13.9421.8784.14145forward
CNT30370757Cajanus cajanOryza glumipatula15.132.9184.71157forward
CNT30328621Cajanus cajanAsparagus officinalis11.6340.685.95121forward
CNT30120689Cajanus cajanCitrus clementina31.8329.0981.87331forward
CNT30147934Cajanus cajanBrachypodium distachyon9.927.0385.44103forward
CNT30581265Cajanus cajanEchinochloa crusgalli13.7527.4584.62143forward
CNT30604352Cajanus cajanOryza punctata14.5226.2284.11151forward

Expression of CNT30620951

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MGGPVVEWALAGGSSLDCEAQEAHHGKTCVLDLCQAQWVKVASTWVEPLFWVKLCVPLELNVANYQNLDPNQCGD*

>peptide 2 (37 aa)
MGQSSFHLGRASFLGQALRSSGTQCSQLPEPRSKSMW*

>peptide 3 (50 aa)
MMVVWSGSLKWVAQLLSGPLPVAAAWTAKPRKPTMARRACLISAKPNGSK*

>peptide 4 (44 aa)
MGAHLNIKQEHSAYSASPIHVTSLVSQALIIQLSENVYKPKPQV*

Sequence

>CNT30620951
CAGCATTAGATGCAAGAAACTTTTTGAATTTGGTTATTAAAACCATTGGTCACATACTATAGTTAATCAGCGTTTATGTAGTAGTAGAACCAAACTTAAT
GAATAAATTAAATTCTTGAAAGACCTCAACCCAATTTGCTGCCATTACCTTTCACAGTGGACTCAATATTTTACGAGTATTAATTTTTTATCCTCTCGAT
TTCGTGCTTAATTAACAATCATGGGAGCACACTTGAACATCAAGCAGGAGCATTCTGCTTACTCAGCCTCTCCAATTCACGTTACTAGTTTAGTTTCACA
AGCACTAATTATCCAGCTAAGTGAAAATGTTTACAAGCCAAAGCCACAAGTCTAAGAGGAGGATGAGAAGGTGTCAATGATGGTTGTGTGGAGTGGGTCA
CTCAAATGGGTGGCCCAGTTGTTGAGTGGGCCCTTGCCGGTGGCAGCAGCTTGGACTGCGAAGCCCAGGAAGCCCACCATGGCAAGACGTGCGTGCTTGA
TCTCTGCCAAGCCCAATGGGTCAAAGTAGCTTCCACCTGGGTAGAGCCTCTTTTCTGGGTCAAGCTCTGCGTTCCTCTGGAACTCAATGTAGCCAATTAC
CAGAACCTCGATCCAAATCAATGTGGTGATTGAGAATGGAAGTGGTTGCCCAAGGTATGATGACCCTTCCACTAGCTCCACCTTCAAATCAAAACGCAAC
TTCATAATTAATTAACAACCCCATCATCATATTATAATATATCAAAATAATTAAACAAAACGCTATTTCTTCATACCCAACTCTCAAAAATCTTATAGTC
CTCTCGTGTTAGCCTTTCACGATTATTCCAAGTAATGAAAAAAGCACAAAATAACTATAACAAAAGTCAATTACTTGATCATAATATTACTTGATCACTA
AAAGTTACCATCCACGAACTTTCTAACATTTTACGTTGGAGAAACTGTTTCTTATTAATTGAAACCAAGTAATCTCATTCATGTTACTAGTTAGGCAGAT
CACATTCCTGGAGAAACTGTTTCTTATTAATTGAACCCAA