Detailed information on CNT30328621


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694831Asparagus officinalisOryza sativa35.237.7388.57105forward
CNT30672010Asparagus officinalisSetaria viridis36.2418.3487.96108forward
CNT30520532Asparagus officinalisSetaria italica37.2513.2988.29111forward
CNT30640553Asparagus officinalisNymphaea colorata37.2513.7986.49111forward
CNT30513329Asparagus officinalisJuglans regia29.5313.7187.588forward
CNT30375654Asparagus officinalisArabidopsis thaliana35.9122.1182.24107forward
CNT30282946Asparagus officinalisChenopodium quinoa43.6212.7883.85130forward
CNT30401900Asparagus officinalisBeta vulgaris74.8322.879.82223forward
CNT30526451Asparagus officinalisPhaseolus vulgaris30.28.4991.1190forward
CNT30485914Asparagus officinalisOlea europaea37.2513.8683.78111forward
CNT30708177Asparagus officinalisGlycine max48.9913.8885.62146forward
CNT30290078Asparagus officinalisTriticum aestivum30.8712.0490.2292forward
CNT30221568Asparagus officinalisHordeum vulgare46.3113.1888.41138forward
CNT30387274Asparagus officinalisTriticum turgidum35.2323.4489.52105forward
CNT30562752Asparagus officinalisActinidia chinensis46.6410.9984.17139forward
CNT30587569Asparagus officinalisMusa acuminata46.6441.4986.33139forward
CNT30236263Asparagus officinalisBrassica oleracea38.9323.8784.48116forward
CNT30554380Asparagus officinalisOryza glaberrima47.3212.7686.52141forward
CNT30436840Asparagus officinalisAegilops tauschii21.4815.887.564forward
CNT30244332Asparagus officinalisAvena sativa30.8711.3289.1392forward
CNT30659570Asparagus officinalisTriticum dicoccoides33.5618.2584100forward
CNT30262014Asparagus officinalisBrassica rapa39.2625.4984.62117forward
CNT30454075Asparagus officinalisSaccharum spontaneum37.2512.1689.19111forward
CNT30132672Asparagus officinalisLolium perenne30.216.139090forward
CNT30229721Asparagus officinalisAnanas comosus46.315.8885.51138forward
CNT30680980Asparagus officinalisTriticum urartu21.4812.2187.564forward
CNT30340460Asparagus officinalisEragrostis tef35.9112.5987.85107forward
CNT30478099Asparagus officinalisArabidopsis halleri35.9115.1383.18107forward
CNT30620951Asparagus officinalisCajanus cajan40.611.6385.95121forward
CNT30596509Asparagus officinalisOryza meridionalis47.329.2886.52141forward
CNT30370789Asparagus officinalisOryza glumipatula47.3210.2586.52141forward
CNT3031825Asparagus officinalisTheobroma cacao35.9121.3682.24107forward
CNT3023899Asparagus officinalisPopulus trichocarpa23.8310.9185.9271forward
CNT30120689Asparagus officinalisCitrus clementina43.6211.4282.31130forward
CNT3036109Asparagus officinalisCucumis melo39.611.3681.36118forward
CNT30147796Asparagus officinalisBrachypodium distachyon27.5220.6587.882forward
CNT30102749Asparagus officinalisOryza rufipogon27.5211.8285.3782forward
CNT30577064Asparagus officinalisOryza barthii27.5210.7385.3782forward
CNT30581381Asparagus officinalisEchinochloa crusgalli37.2539.9388.29111forward
CNT30496270Asparagus officinalisDigitaria exilis37.2511.2588.29111forward
CNT30116923Asparagus officinalisOryza nivara31.8811.4287.3795forward
CNT30556512Asparagus officinalisPanicum hallii21.4813.287.564forward
CNT30551395Asparagus officinalisOryza brachyantha38.5913.2881.74115forward
CNT30112169Asparagus officinalisFicus carica42.627.5785.04127forward
CNT30725792Asparagus officinalisLupinus angustifolius28.523.3587.0685forward
CNT3039307Asparagus officinalisMarchantia polymorpha26.8524.18580forward

Expression of CNT30328621

Nothing found.

Peptides detected in this lncRNA

>peptide 1 (98 aa)
PGRGGRRTCLLGTVSFLGPALRFSGTRCIRSQEPRPISMWSGRREGVAPGDASEGLDGEGTESSEHGPPTVDELALAEPLEAENLRVRLKRRRLHIRSL

>peptide 2 (86 aa)
QAEGVEELASWVQSLFWVQLCVSLELDVSDHKNLDPYQCGQGEGKGLPQVTPVRASTERAPRVASMAHLPWMSSHSRNLWRPKTSE*

>peptide 3 (50 aa)
ARPRGSKNLPPGYSLFSGSSSAFLWNSMYPITRTSTHINVVREKGRGCPR*

Sequence

>CNT30328621
GCCAGGCCGAGGGGGTCGAAGAACTTGCCTCCTGGGTACAGTCTCTTTTCTGGGTCCAGCTCTGCGTTTCTCTGGAACTCGATGTATCCGATCACAAGAA
CCTCGACCCATATCAATGTGGTCAGGGAGAAGGGAAGGGGTTGCCCCAGGTGACGCCAGTGAGGGCCTCGACGGAGAGGGCACCGAGAGTAGCGAGCATG
GCCCACCTACCGTGGATGAGCTCGCACTCGCGGAACCTCTGGAGGCCGAAAACCTCCGAGTAAGGCTGAAACGGCGTCGACTTCACATCCGAAGTCTC