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Detailed information on CNT30620568


BLAST search results

BLAST vs Swiss-Prot:
sp|P27489|CB23_SOLLC, E-value = 1e-108

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639243Cajanus cajanNymphaea colorata31.8223.7885.27224forward
CNT30728364Cajanus cajanCorchorus capsularis28.9829.2385.78204forward
CNT30381107Cajanus cajanManihot esculenta33.5239.0787.71236forward
CNT30526626Cajanus cajanPhaseolus vulgaris49.2999.7190.49347forward
CNT30629897Cajanus cajanVigna unguiculata29.2616.8293.2206forward
CNT30711010Cajanus cajanGlycine max69.0343.1691.77486forward
CNT30156649Cajanus cajanPistacia vera32.5314.8886.46229forward
CNT30564558Cajanus cajanActinidia chinensis30.1156.0887.26212forward
CNT30238350Cajanus cajanBrassica oleracea26.9918.4383.68190forward
CNT30510187Cajanus cajanSolanum lycopersicum2519.9585.23176forward
CNT30243483Cajanus cajanAvena sativa55.8252.6881.93393forward
CNT3062296Cajanus cajanArabidopsis lyrata26.9940.8683.68190forward
CNT30652643Cajanus cajanRosa chinensis28.4131.385.5200forward
CNT30207651Cajanus cajanHelianthus annuus34.2320.9283.82241forward
CNT30359477Cajanus cajanLactuca sativa2529.4386.36176forward
CNT30574379Cajanus cajanVitis vinifera34.0924.1286.67240forward
CNT30645477Cajanus cajanCannabis sativa29.454.3383.57207forward
CNT3058205Cajanus cajanAmborella trichopoda29.2630.0787.38206forward
CNT3022022Cajanus cajanPopulus trichocarpa32.2449.6784.58227forward
CNT3035078Cajanus cajanCucumis melo23.4417.383.64165forward
CNT30148272Cajanus cajanBrachypodium distachyon49.1536.5481.79346forward
CNT30581538Cajanus cajanEchinochloa crusgalli56.3943.7282.12397forward
CNT30726943Cajanus cajanLupinus angustifolius34.0938.2290240forward

Expression of CNT30620568

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MRNPSTRPIRTTWKPSTARMLCAWTRFGFPK*

>peptide 2 (33 aa)
MANLPFLISLTFSSAKVAGSSARPSGSKYWPPG*

Sequence

>CNT30620568
TCTGACTAGCATGAGTATTATGTCTCATTTAATGAGTCTTATTCTTCGGTTAATAGAATTAACATAAAATTCCCATAGGTTGCTTTAGACAAAACTAGAT
CAACAAACATGGGATATCCCAGGTTTAAAATGAACCTTAGTCCTTAAGAAGTACACTAATCCGACAATTATTATGATCATAATCTACACATAAATCACAA
CAAGGGATGGATTATGGATACATTTAAGAACCGGGCACAAACTTAGTGGCATAGACCCAAGCATTGTTGGCCACAGGGTTGTCAAGGTGGTCCAAAAGAT
TCTCCAATGGGCCTTTTCCGGTGACAATGGCCTGAACAAAGAAACCAAACATAGAGAACATGGCCAACCTTCCATTCTTGATCTCCTTGACTTTTAGCTC
AGCAAAAGTGGCAGGGTCATCAGCAAGGCCCAGTGGGTCAAAGTACTGGCCCCCAGGGTAGAGCCCATTGATGCGGAACCCTTCAACAAGGCCCATCAGA
ACAACTTGGAAGCCCAGCACCGCCAGGATGCTTTGTGCATGGACAAGGTTTGGGTTCCCCAAGTAGTCAAGCCCACCTTCTGAGAATATTTGGGCTCCAG
CTTTGAACCACACTGGCTCCTTGAAGTCCACTCTCACCCACTTCTCAAGGACTTCTGGGGTGATGCATCCTAGTGCTCCAAGCATGGCCCAACGCCCATG
GATC