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Detailed information on CNT30574379


BLAST search results

BLAST vs Swiss-Prot:
sp|P27489|CB23_SOLLC, E-value = 1e-64

BLAST vs NONCODE:
NONBNAT003428, E-value = 9e-25

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516186Vitis viniferaJuglans regia8.0420.579080forward
CNT30728364Vitis viniferaCorchorus capsularis26.7338.1185.34266forward
CNT30381107Vitis viniferaManihot esculenta27.2444.8784.87271forward
CNT30526626Vitis viniferaPhaseolus vulgaris17.1949.1486.55171forward
CNT30629897Vitis viniferaVigna unguiculata20.916.9886.06208forward
CNT30710766Vitis viniferaGlycine max20.717.5285.92206forward
CNT30156649Vitis viniferaPistacia vera31.0620.0883.17309forward
CNT30564557Vitis viniferaActinidia chinensis28.947284.38288forward
CNT30238317Vitis viniferaBrassica oleracea29.6530.9579.66295forward
CNT30510187Vitis viniferaSolanum lycopersicum19.121.5483.16190forward
CNT30309482Vitis viniferaCamelina sativa20.476.0381.28203forward
CNT3062573Vitis viniferaArabidopsis lyrata21.9137.6583.03218forward
CNT30652643Vitis viniferaRosa chinensis29.7546.3283.11296forward
CNT30207651Vitis viniferaHelianthus annuus27.9424.1380.94278forward
CNT30625697Vitis viniferaDaucus carota8.6439.2783.7286forward
CNT30620568Vitis viniferaCajanus cajan24.1234.0986.67240forward
CNT30358309Vitis viniferaLactuca sativa21.8122.682.03217forward
CNT3035078Vitis viniferaCucumis melo23.9224.9580.25238forward
CNT30604338Vitis viniferaOryza punctata29.9544.0880.54298forward
CNT30556551Vitis viniferaPanicum hallii24.8241.8682.59247forward
CNT30726943Vitis viniferaLupinus angustifolius25.8340.9284.05257forward

Expression of CNT30574379

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MNKVGVAQVVQAALGEDLSSSFEPDWFFEVHSKPLLKDFWGDAAQCSKHSPTPVDHLKPFIGSK*

>peptide 2 (59 aa)
MSLHKTGEEAKTSSLRSRHKLGGVDPCVISNWVVKVVQEDRSIVHQGTGCCHLQLQEGH*

Sequence

>CNT30574379
GTTTGAGAGTTATTTCATTTACCGGAAAATGCAGTGTTCCATCTGAAACATAAATTATAAATTATATTGAATCTACTAACACAGAATGTTCTGTTCTCAA
TGAGTTTACACAAAACAGGTGAAGAAGCAAAGACCAGCAGTCTAAGATCCAGGCACAAACTTGGTGGCGTAGACCCATGCGTTATTAGCAACTGGGTTGT
CAAGGTGGTCCAAGAGGATCGAAGTATTGTCCACCAGGGTACAGGTTGTTGCCATCTCCAACTCCAGGAAGGCCATTAATGCGGAAGCCCTCAACAAGAC
CCATGAGGACAACTTGGAAGCCGAGGACTGCCAGAATGCTCTGGGCATGAACAAGGTTGGGGTTGCCCAAGTAGTCCAGGCCGCCCTCGGAGAAGATTTG
AGCTCCAGCTTTGAACCAGATTGGTTCTTTGAAGTCCACTCTAAGCCACTTCTCAAGGACTTCTGGGGTGATGCAGCCCAGTGCTCCAAGCATAGCCCAA
CGCCCGTGGATCACCTAAAACCATTTATAGGATCAAAGTAGCATCATTACCTTCATATTACATTCTACAGACTGTTCAGATTAATCAGAAAGGGTTTGAG
GAACAGGGGAGCAAAATACTGAAAACAGCCTAGAAAGGAACCCTTTTCTATTTCCATGCATATATTTTTAGGTTTTTTGCTTTCTTTTACTTGGTTTTTC
TATTTTTGACATCATAATGGAGTATAGCCACACGGCAAAAGAAGTTTGCTTCTGTGGGTTCTGGTTGTATCAGAGTTCATAAAGGCATCCACCTCACATT
TTTAAGAAACAAAGCGATGGTTCTTGTGAGCTTGAGTCTCTCAAGTAAAAATGTTCTTTAGTAGGTTTTGCTTTAAACACCAATTTTTCAGATTTATGGG
GGCAAATCCATGTCCTTGGGATTCAAAAGCTCTCTGAAAACATCATTTTTAGTAAATTCTTGATCATCTTCACGGTAAACCAACTAGCAGTGATG