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Detailed information on CNT30564558


BLAST search results

BLAST vs Swiss-Prot:
sp|P14279|CB25_SOLLC, E-value = 2e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516186Actinidia chinensisJuglans regia38.3637.2890.34145forward
CNT30526626Actinidia chinensisPhaseolus vulgaris41.0144.5489.03155forward
CNT30630022Actinidia chinensisVigna unguiculata34.6645.4989.31131forward
CNT30505375Actinidia chinensisNicotiana attenuata28.8438.9389.91109forward
CNT30710854Actinidia chinensisGlycine max55.0313.9590.38208forward
CNT30510187Actinidia chinensisSolanum lycopersicum46.319.8485.14175forward
CNT30620568Actinidia chinensisCajanus cajan56.0830.1187.26212forward
CNT30645477Actinidia chinensisCannabis sativa59.2658.7988.39224forward
CNT3058205Actinidia chinensisAmborella trichopoda45.7725.2690.17173forward

Expression of CNT30564558

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MAWTKNPNMENMASLPFLISFTLSSAKVTGSSARPSGSKY*

Sequence

>CNT30564558
TCATCTTGAATGACAACACAATAACAAGATAATTGAGAGTTTACGATCCAGGCACAAACTTGGTGGCATAGACCCAAGCATTGTTAGCTACAGGGTTGTC
AAGGTGGTCCAAGAGGTTCTCAAGTGGGCCCTTGCCAGTGACAATGGCTTGGACAAAGAACCCGAACATGGAGAACATGGCTAGCCTACCATTCTTGATC
TCCTTCACCTTGAGCTCAGCAAAGGTAACCGGGTCATCGGCAAGGCCTAGTGGGTCAAAGTATTGAATGCCGTTGATGCGGTAACCCTCGACGAGGCCCA
TTAAGACGACTTGGAAGCCAAGCACGGCTAGAATACTCTGGGCATGGACCAAATTGGGGTTGCCCAAGTAGTCTAGCC