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Detailed information on CNT30526626


BLAST search results

BLAST vs Swiss-Prot:
sp|P14279|CB25_SOLLC, E-value = 9e-60

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639243Phaseolus vulgarisNymphaea colorata46.2617.0983.85161forward
CNT30728364Phaseolus vulgarisCorchorus capsularis38.5119.290.3134forward
CNT30381107Phaseolus vulgarisManihot esculenta47.9927.6588.02167forward
CNT30630022Phaseolus vulgarisVigna unguiculata35.9243.490.4125forward
CNT30505375Phaseolus vulgarisNicotiana attenuata31.6139.2989.09110forward
CNT30711010Phaseolus vulgarisGlycine max98.2830.3786.26342forward
CNT30156649Phaseolus vulgarisPistacia vera47.9910.8585.63167forward
CNT30564558Phaseolus vulgarisActinidia chinensis44.5441.0189.03155forward
CNT30238350Phaseolus vulgarisBrassica oleracea35.0611.8386.89122forward
CNT30510187Phaseolus vulgarisSolanum lycopersicum30.1711.985.71105forward
CNT30554485Phaseolus vulgarisOryza glaberrima62.0738.7882.41216forward
CNT3062296Phaseolus vulgarisArabidopsis lyrata42.8232.0485.91149forward
CNT30652643Phaseolus vulgarisRosa chinensis50.5727.5483.52176forward
CNT30207651Phaseolus vulgarisHelianthus annuus5015.183.91174forward
CNT30620568Phaseolus vulgarisCajanus cajan99.7149.2990.49347forward
CNT30359477Phaseolus vulgarisLactuca sativa48.8528.4383.53170forward
CNT30574379Phaseolus vulgarisVitis vinifera49.1417.1986.55171forward
CNT30645477Phaseolus vulgarisCannabis sativa41.6738.0686.21145forward
CNT3058205Phaseolus vulgarisAmborella trichopoda40.820.7386.62142forward
CNT3022022Phaseolus vulgarisPopulus trichocarpa51.4439.1782.68179forward
CNT3035078Phaseolus vulgarisCucumis melo47.9917.5182.04167forward
CNT30726943Phaseolus vulgarisLupinus angustifolius50.2927.8790.29175forward

Expression of CNT30526626

Peptides detected in this lncRNA

>peptide 1 (29 aa)
PKGSQVVLCQSQWLGQRSQTWRTWPTFHS*

>peptide 2 (35 aa)
IQKVLKWSFASHNGLDKEAKHGEHGQPSILDLLDL*

>peptide 3 (31 aa)
MRNPSTRPISTTWKPSTAKMLCACTRLGFPK*

>peptide 4 (56 aa)
SKRFSSGPLPVTMAWTKKPNMENMANLPFLISLTFSSAKVTGSSARPRGSKYWPPG*

Sequence

>CNT30526626
ATCCAAAAGGTTCTCAAGTGGTCCTTTGCCAGTCACAATGGCTTGGACAAAGAAGCCAAACATGGAGAACATGGCCAACCTTCCATTCTTGATCTCCTTG
ACCTTTAGCTCAGCAAAAGTGACAGGGTCATCAGCAAGGCCAAGAGGGTCAAAGTACTGGCCACCAGGGTAGAGGCCATTGATGCGGAATCCTTCAACAA
GACCCATCAGCACAACTTGGAAGCCTAGCACTGCCAAGATGCTCTGTGCATGCACAAGGTTGGGGTTCCCCAAATAGTCTAGGCCACCTTCTGAGAATAT
TTGAGCTCCTGCTTTGAACCAAACTGGCTCCTTGAAGTCCACTTTCAC