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Detailed information on CNT30629897


BLAST search results

BLAST vs Swiss-Prot:
sp|P27489|CB23_SOLLC, E-value = 1e-63

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520395Vigna unguiculataSetaria italica13.6331.6383.83167forward
CNT30728364Vigna unguiculataCorchorus capsularis14.6125.6483.8179forward
CNT30381107Vigna unguiculataManihot esculenta16.7333.9483.9205forward
CNT30710849Vigna unguiculataGlycine max28.0828.5793.02344forward
CNT30564557Vigna unguiculataActinidia chinensis15.8448.584.02194forward
CNT30510187Vigna unguiculataSolanum lycopersicum14.7820.5283.98181forward
CNT30652643Vigna unguiculataRosa chinensis14.8628.4885.16182forward
CNT30213636Vigna unguiculataHelianthus annuus14.0437.5584.3172forward
CNT30620568Vigna unguiculataCajanus cajan16.8229.2693.2206forward
CNT30357963Vigna unguiculataLactuca sativa14.7826.3183.43181forward
CNT30574379Vigna unguiculataVitis vinifera16.9820.986.06208forward
CNT30645477Vigna unguiculataCannabis sativa8.928.6186.24109forward
CNT30726147Vigna unguiculataLupinus angustifolius12.4922.390.85153forward

Expression of CNT30629897

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MQPSAPSMAQRPWITLFHKNNFLLLLGKKEINK*

>peptide 2 (50 aa)
MENMANLPFLISFTLSSAKVVGSSARPSGTTWKPSTAKMLWAWTRFGLPK*

>peptide 3 (69 aa)
AFAGYNGLNKKSKHGEHGQPSILDLLHFELSKSCWVISKAQWNNLEAQHCQDALGMDKVWVAQIVKPTF*

Sequence

>CNT30629897
GCCTTTGCCGGTTACAATGGCTTGAACAAAAAATCCAAACATGGAGAACATGGCCAACCTTCCATTCTTGATCTCCTTCACTTTGAGCTCAGCAAAAGTT
GTTGGGTCATCAGCAAGGCCCAGTGGAACAACTTGGAAGCCCAGCACTGCCAAGATGCTTTGGGCATGGACAAGGTTTGGGTTGCCCAAATAGTCAAGCC
CACCTTCTGAGAATATCTGGGCCCCAGCTTTGAACCACACAGGCTCCTTGAAGTCCACTCTCAACCACTTCTCTAGCACCTCTGGGGTGATGCAGCCCAG
TGCTCCAAGCATGGCCCAACGCCCATGGATCACCTTATTCCACAAAAACAATTTTCTGTTATTATTGGGAAAAAAGGAAATAAATAAATAAAATTAAGCG
CCACACCCATAGTTATGAGTCTTTTACACGTATATATGATCTTAAATTATTCACTTTGTTGTAACTATAATTTCTTGTTCCTACACAAATTTTTTTAGCA
GTTTTTACTTTCAGAAATCCAATTATAGTATCAACCACGAATATCAAAGCTTGACTTTTAAGTATGTGCAGGAACTAAGAGTTATGACTTTATTGGTATA
AAGATTAAAACTTTGAATGAGGAGAATTATAGATAGCAAAGAAATAATTTAACCAAATTATGATTAGCCAAACTAAAATTTGCCCTATAATTAATTTCAC
TAGGACAAATAGTAATTCACGATAATGTACTGATTTTTCAATTTATTTAACCTATTTGTACGTATTCATATATAATACTTAACCTTTTCTACTATTTTAA
AGTGAGATTAGTTTAATTTTTTTATCGATAATTATTAGTTATTAATATTTTATTAGTAAAGTAATTGAATTTTTAATATCTGTCATTTTCTTTTTTAATT
TTTCAAATCAATATTATAACTGTTGGAAAGTTGAATGCAAATTTTTTTCCAATATCGTTCCAATTTTACCACTTAAACCTTTCAAATAAATCTTATAATT
TTCACTTCAACCTTTCAAATCAATGTTTTAATTTTCAAATGTTAATTGAAAAGTTGAGGGCACAAATTCTCCCTCCCCTTTCGTTGTAATATTACCACTA
AACCAATTTATAAATCTTTGCGATTAGTTAGCATGGTAAATTAGTTTGAAGAATATGTTAAAGAGAAGGAAAAAGAAAGAAGCATATTATTGTTGTTGAG
AGAGTTTAAGGGTAGAAAAGTAACC