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Detailed information on CNT30689574


BLAST search results

BLAST vs Swiss-Prot:
sp|P24067|BIP2_MAIZE, E-value = 1e-42

BLAST vs NONCODE:
NONATHT003784, E-value = 5e-30

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512873Triticum urartuJuglans regia74.0930.0581.17223forward
CNT30727335Triticum urartuCorchorus capsularis87.7140.6881.44264forward
CNT30383257Triticum urartuTriticum turgidum23.9210.8987.572forward
CNT30588413Triticum urartuMusa acuminata15.6120.889.3647forward
CNT30237452Triticum urartuBrassica oleracea35.8817.1488.89108forward
CNT30239820Triticum urartuAvena sativa70.7683.295.31213forward
CNT3082625Triticum urartuBrassica juncea22.5921.5285.2968forward
CNT30613247Triticum urartuArabis alpina52.8252.383.65159forward
CNT3041009Triticum urartuChlamydomonas reinhardtii17.6124.6588.6853forward
CNT30364564Triticum urartuSorghum bicolor77.4149.5792.27233forward
CNT30154231Triticum urartuPrunus persica50.545.2487.5152forward
CNT30569910Triticum urartuVitis vinifera33.8924.8886.27102forward
CNT30704517Triticum urartuPrunus avium38.5419.6386.21116forward
CNT30150244Triticum urartuBrachypodium distachyon74.7542.4587.56225forward
CNT30726090Triticum urartuLupinus angustifolius47.1820.0880.99142forward
CNT3050605Triticum urartuCucumis sativus42.8624.3486.82129forward

Expression of CNT30689574

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MRSFTFLSSSANSSASLTIRSISSWLRRPFSLVMVIFSDLPVPLSSAFT

>peptide 2 (99 aa)
RRHDGVAHGLHLLELLLVVLLLGRLLVSQLVLVADGVLHVVDVGLKLVPGIDALLHLLVLLGELLRLLDHPVDLLLAQTALLVGDGDLLRLARALVLSLH

Sequence

>CNT30689574
CGCCGACACGATGGGGTTGCACACGGCCTCCACCTCCTTGAGCTTCTCCTCGTAGTCCTCCTTCTCGGCCGTCTGCTTGTCAGCCAGCTTGTCCTTGTCG
CCGACGGTGTTCTTCATGTTGTAGACGTAGGTCTCAAGCTGGTTCCGGGCATCGATGCGCTCCTTCACCTTCTTGTCCTCCTCGGCGAACTCCTCCGCCT
CCTTGACCATCCGGTCGATCTCCTCCTGGCTCAGACGGCCCTTCTCGTTGGTGATGGTGATCTTCTCAGACTTGCCCGTGCCCTTGTCCTCAGCCTTCAC
G