Detailed information on CNT30488808


BLAST search results

BLAST vs Swiss-Prot:
sp|P12062|CB26_PETSP, E-value = 9e-89

BLAST vs NONCODE:
NONSTUT002515, E-value = 5e-62

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512563Olea europaeaJuglans regia49.8117.285.38260forward
CNT30701193Olea europaeaQuercus lobata49.8120.6590260forward
CNT30500934Olea europaeaCoffea canephora36.5911.9185.86191forward
CNT30616538Olea europaeaSesamum indicum39.2741.7586.34205forward
CNT30272382Olea europaeaChenopodium quinoa39.4645.3785.92206forward
CNT30378910Olea europaeaManihot esculenta49.2322.1786.77257forward
CNT30404250Olea europaeaBeta vulgaris37.3619.0183.08195forward
CNT30631092Olea europaeaVigna unguiculata50.3823.2583.65263forward
CNT30711471Olea europaeaGlycine max50.5719.582.2264forward
CNT30560173Olea europaeaActinidia chinensis46.3626.8390.08242forward
CNT3085816Olea europaeaVigna radiata47.1338.5682.52246forward
CNT30172058Olea europaeaTrifolium pratense50.3817.3484.41263forward
CNT30313266Olea europaeaCamelina sativa48.6642.1980.71254forward
CNT30605341Olea europaeaGossypium raimondii50.3824.1184.41263forward
CNT30648173Olea europaeaRosa chinensis46.9314.187.76245forward
CNT30417081Olea europaeaPapaver somniferum37.1619.4884.02194forward
CNT30572302Olea europaeaVitis vinifera31.4223.7389.63164forward
CNT3028352Olea europaeaTheobroma cacao50.3828.4386.31263forward
CNT3022417Olea europaeaPopulus trichocarpa28.1657.290.48147forward
CNT30326027Olea europaeaAsparagus officinalis46.3642.5384.3242forward
CNT30119335Olea europaeaCitrus clementina49.8139.5185260forward
CNT3035896Olea europaeaCucumis melo50.5729.3385.98264forward
CNT30723501Olea europaeaLupinus angustifolius21.6510.4688.5113forward

Expression of CNT30488808

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MFLLVSFFLCCGDLLSALLGWLKRMGEECLYM

>peptide 2 (29 aa)
MAQRQWITSSSRFLANVSGSADSPAVSQP*

>peptide 3 (29 aa)
MMEFAQRMDPSTWGGQVELEFTKCSGEHF*

Sequence

>CNT30488808
TGAGAAGATCTGAGCTCCAGCCTTGAACCAAACAGCCTCACCAAACTTGACACCATTCTTGGCAAGGATTTCTGGGAAAACACAGCCCAATGCGCCGAGC
ATGGCCCAACGGCAGTGGATAACCTCAAGCTCACGGTTCTTGGCAAATGTCTCAGGGTCTGCTGATAGTCCAGCTGTGTCCCAACCATAATCACCTGGGA
ATTCACCAGTGAGGTATGATGGAGTTTGCTCAGAGAATGGACCCAAGTACTTGGGGCGGTCAGGTTGAGCTAGAATTTACCAAATGCTCTGGGGAGCACT
TTTAACAGTACGTCTCATGGTGAAGCGGCCACCTCCGAGGTTGCCAACCTTTCTGATGAGCTGATTCTGGGATTTCAAGGCTGTCTGGCCTGCAAATGCA
GATTGTTGGATTGCTGAAGTTGCCATGTTTTTGCTCGTGAGTTTCTTTCTTTGTTGCGGTGATTTGCTTTCTGCTTTGTTGGGATGGTTAAAGAGGATGG
GAGAAGAGTGTTTATATATGGG