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Detailed information on CNT30701193


BLAST search results

BLAST vs Swiss-Prot:
sp|Q10HD0|CB23_ORYSJ, E-value = 6e-150

BLAST vs NONCODE:
NONSTUT002514, E-value = 2e-118

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317234Quercus lobataCorylus avellana27.2455.9585.42343forward
CNT30500934Quercus lobataCoffea canephora26.6920.9581.25336forward
CNT30268034Quercus lobataChenopodium quinoa10.8855.2486.13137forward
CNT30526271Quercus lobataPhaseolus vulgaris15.2528.8386.98192forward
CNT30631012Quercus lobataVigna unguiculata49.849.3785.33627forward
CNT30200636Quercus lobataPisum sativum16.0443.5384.16202forward
CNT30488808Quercus lobataOlea europaea20.6549.8190260forward
CNT30711475Quercus lobataGlycine max28.0424.2186.4353forward
CNT3085816Quercus lobataVigna radiata29.3157.8484.01369forward
CNT30539463Quercus lobataBrassica napus36.8564.2779.74464forward
CNT30238958Quercus lobataBrassica oleracea33.2847.5181.15419forward
CNT30510148Quercus lobataSolanum lycopersicum20.9762.2684.09264forward
CNT30172025Quercus lobataTrifolium pratense44.4848.5385.36560forward
CNT30605341Quercus lobataGossypium raimondii39.5645.6586.75498forward
CNT30204126Quercus lobataHelianthus annuus27.0166.4182.65340forward
CNT30716010Quercus lobataMalus domestica golden18.1139.3185.09228forward
CNT30625449Quercus lobataDaucus carota24.3833.3784.69307forward
CNT30480205Quercus lobataArabidopsis halleri41.9469.9379.73528forward
CNT30572302Quercus lobataVitis vinifera13.4224.4690.53169forward
CNT3028352Quercus lobataTheobroma cacao20.7328.2288.89261forward
CNT30119392Quercus lobataCitrus clementina33.3645.787.86420forward
CNT3035896Quercus lobataCucumis melo22.6431.6786.32285forward
CNT30112551Quercus lobataFicus carica37.8977.0683.23477forward
CNT30723501Quercus lobataLupinus angustifolius28.232.8785.92355forward

Expression of CNT30701193

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVKQVLNWTLSSNNSLNKETKHGEHCQPPIL*

>peptide 2 (31 aa)
MVKQVLNWTLSSNNSLNKETKHGEHCQPPIL*

>peptide 3 (34 aa)
MNEVWVAKIIKTTFRENLCTSLEPNCFTKLDTIL*

>peptide 4 (34 aa)
MNEVWVAKIIKTTFRENLCTSLEPNCFTKLDTIL*

>peptide 5 (35 aa)
MLQDHQPVQVGQRHHQGKWGQVLHRVVLHQLCILQ*

>peptide 6 (35 aa)
MENIANLPFFSSFTFNSANASGSSASPSGSKAPPG*

>peptide 7 (35 aa)
MENIANLPFFSSFTFNSANASGSSASPSGSKAPPG*

>peptide 8 (35 aa)
MLQDHQPVQVGQRRHQGKWGQVLHRVVLHQLCILQ*

>peptide 9 (29 aa)
MAHRLWITSSSRFLANVSGSADNPAVSQP*

>peptide 10 (30 aa)
MMEFAQRMVPSTLGGLGHTCLICHIYRLIM*

Sequence

>CNT30701193
AAAGCAGTTTGTGGTATCATCAATACAATATAGATGAACACAGCAAGAGAGAAGTTGAACACAAGCAAGAAGATTGATGAGTAAAGTTACAGTAGAACAT
TTAAGTTTCTTCATTTTCCAGGGACAAAGTTAGTGGCGTAGGCCCATGCATTGTTGGCGACTGGGTCAGCAACATGGTCAAACAGGTTCTCAATTGGACC
CTTTCCAGTAACAATAGCCTGAACAAAGAAACCAAACATGGAGAACATTGCCAACCTCCCATTCTTTAGTTCCTTCACCTTCAATTCTGCGAATGCTTCA
GGATCATCAGCCAGTCCAAGTGGGTCAAAGGCGCCACCAGGGTAAATGGGGTCAAGTCCTTCACCGAGTGGTCCTCCACCAACTCTGTATCCTTCAATGA
AACCCATAAGCACAACTTGAACAGCCCAGATTGCTAAGATGCTTTGTGCATGAATGAGGTTTGGGTTGCCAAGATAATCAAGACCACCTTCAGAGAAAAT
CTGTGCACCAGCCTTGAACCAAACTGCTTCACCAAACTTGACACCATTCTTTGAAAGGACTTCAGGGAACACACAGCCCAAAGCTCCAAGCATGGCCCAT
GCATTGTTGGCGACTGGGTCAGCAACATGGTCAAACAGGTTCTCAATTGGACCCTTTCCAGTAACAATAGCCTGAACAAAGAAACCAAACATGGAGAACA
TTGCCAACCTCCCATTCTTTAGTTCCTTCACCTTCAATTCTGCGAATGCTTCAGGATCATCAGCCAGTCCAAGTGGGTCAAAGGCACCACCAGGGTAAAT
GGGGTCAAGTCCTTCACCGAGTGGTCCTCCACCAACTCTGTATCCTTCAATGAAGCCCATAAGCACAACTTGAACAGCCCAGATTGCCAAGATGCTTTGT
GCATGAATGAGGTTTGGGTTGCCAAGATAATCAAGACCACCTTCAGAGAAAATCTGTGCACCAGCCTTGAACCAAACTGCTTCACCAAACTTGACACCAT
TCTTTGAAAGGATTTCAGGGAACACACAGCCCAAAGCTCCAAGCATGGCCCATCGGCTGTGGATTACCTCCAGCTCACGGTTCCTAGCAAATGTCTCAGG
GTCTGCTGATAATCCAGCAGTGTCCCAGCCATAGTCACCAGGGAATTCACCAGTAAGGTATGATGGAGTTTGCTCAGAGAATGGTCCCAAGTACTTTGGG
CGGTCTGGGCCATACCTGTTTAATTTGTCACATTTACAGGTTAATTATGTGAGTTTGTA