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Detailed information on CNT3085816


BLAST search results

BLAST vs Swiss-Prot:
sp|P14279|CB25_SOLLC, E-value = 8e-82

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512563Vigna radiataJuglans regia57.8424.483.74369forward
CNT30701193Vigna radiataQuercus lobata57.8429.3184.01369forward
CNT30373937Vigna radiataArabidopsis thaliana53.4580.4279.47341forward
CNT30500934Vigna radiataCoffea canephora24.619.7985.99157forward
CNT30378978Vigna radiataManihot esculenta54.8630.5182.86350forward
CNT30526271Vigna radiataPhaseolus vulgaris32.631.2396.63208forward
CNT30630954Vigna radiataVigna unguiculata85.2794.2892.1544forward
CNT30488808Vigna radiataOlea europaea38.5647.1382.52246forward
CNT30708305Vigna radiataGlycine max43.7334.5390.68279forward
CNT30234046Vigna radiataBrassica oleracea54.8660.4578.86350forward
CNT30172058Vigna radiataTrifolium pratense58.7824.7287.73375forward
CNT30145752Vigna radiataMedicago truncatula15.9930.3691.18102forward
CNT30264606Vigna radiataBrassica rapa33.0724.6281.04211forward
CNT30605341Vigna radiataGossypium raimondii58.7834.3784375forward
CNT30648173Vigna radiataRosa chinensis55.1720.2682.95352forward
CNT30480205Vigna radiataArabidopsis halleri51.7243.7178.79330forward
CNT30409824Vigna radiataPapaver somniferum56.954.0280.72363forward
CNT30572302Vigna radiataVitis vinifera23.822286.84152forward
CNT3028352Vigna radiataTheobroma cacao39.527.2484.13252forward
CNT3022417Vigna radiataPopulus trichocarpa21.9454.4786.43140forward
CNT30119392Vigna radiataCitrus clementina58.7840.8182.4375forward
CNT3036398Vigna radiataCucumis melo40.9147.1181.23261forward
CNT30112551Vigna radiataFicus carica57.0558.882.69364forward
CNT3040152Vigna radiataMarchantia polymorpha47.8130.9681.64305forward

Expression of CNT3085816

Peptides detected in this lncRNA

>peptide 1 (71 aa)
KRSSTNSVTFNKPHKHNLHSPDGKNALSMDQVWVPQIVKSSLREDLCTSLEPHCLTEFHTILLKNLWEDDS*

>peptide 2 (43 aa)
MLIAGKQWWPWLCCVVKGLFFLWFCECVVENEEGTTKVYRRVA*

>peptide 3 (41 aa)
MMESGQKMDPRALLTVRRMLVRPLPEPPVLRTNSLTCFRAV*

Sequence

>CNT3085816
CCAAGAGGTCCTCCACCAACTCTGTAACCTTCAACAAACCCCATAAGCACAACCTGCACAGCCCAGATGGCAAGAATGCTCTGAGCATGGATCAGGTTTG
GGTTCCCCAAATAGTCAAGTCCTCCCTCAGAGAAGATCTGTGCACCAGCCTTGAACCACACTGCCTCACCGAATTTCACACCATTCTTCTCAAGAATCTC
TGGGAAGACGATTCCTAGAGCACCAAGCATGGCCCATCTGCTGTGAATCACCTCCAACTCACGGTTCCTGGCAAAGGTTTCAGGGTCAGCTGATAATCCA
GCTGTGTCCCATCCGTAGTCACCAGGGAATTCACCGGTCAGGTATGATGGAATCTGGTCAGAAAATGGACCCAAGAGCACTTTTGACGGTGCGGCGCATG
TTGGTGCGACCTTTGCCGGAGCCACCGGTCTTGCGGACGAACTCATTGACCTGCTTCAGAGCTGTTTGACCAGCGAATGCTGATTGCTGGAAAGCAGTGG
TGGCCATGGCTGTGTTGTGTGGTTAAAGGTCTCTTCTTTCTTTGGTTTTGTGAGTGTGTTGTGGAGAATGAAGAAGGTACTACAAAAGTTTATAGAAGGG
TGGCATGATATTGTGGATGAGGATATGCACAACTCAGC