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Detailed information on CNT30648173


BLAST search results

BLAST vs Swiss-Prot:
sp|P27518|CB21_GOSHI, E-value = 8e-137

BLAST vs NONCODE:
NONSTUT002514, E-value = 4e-102

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512563Rosa chinensisJuglans regia25.9129.7685.78450forward
CNT30701229Rosa chinensisQuercus lobata38.3434.2684.23666forward
CNT3070976Rosa chinensisQuercus suber19.9268.1184.39346forward
CNT30378916Rosa chinensisManihot esculenta37.1950.3583.13646forward
CNT30631012Rosa chinensisVigna unguiculata37.1350.7980.62645forward
CNT30488808Rosa chinensisOlea europaea14.146.9387.76245forward
CNT30709151Rosa chinensisGlycine max27.5266.7681.8478forward
CNT30561790Rosa chinensisActinidia chinensis30.6977.1384.05533forward
CNT3085816Rosa chinensisVigna radiata20.2655.1782.95352forward
CNT30172025Rosa chinensisTrifolium pratense33.2850.0981.66578forward
CNT30605341Rosa chinensisGossypium raimondii26.1441.6184.8454forward
CNT30360562Rosa chinensisLactuca sativa37.3171.1379.78648forward
CNT30410959Rosa chinensisPapaver somniferum32.8764.2380.21571forward
CNT3028352Rosa chinensisTheobroma cacao16.5831.1485.07288forward
CNT30326027Rosa chinensisAsparagus officinalis19.6359.9385.04341forward
CNT30119392Rosa chinensisCitrus clementina37.4870.8481.72651forward
CNT3035896Rosa chinensisCucumis melo15.9530.7884.84277forward
CNT30112551Rosa chinensisFicus carica26.9475.6185.04468forward
CNT30723501Rosa chinensisLupinus angustifolius18.7730.1983.44326forward
CNT3040649Rosa chinensisMarchantia polymorpha30.1163.2481.07523forward

Expression of CNT30648173

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MEVIASLPFLISFTLSSAKASGSSANPSGSKAPPG*

>peptide 2 (64 aa)
MQFQKCTYHMLSGALLTVRLMEIRPPPRPPIFRTSSFDGFKAVWPAKADCWIAEVAMTMCFSLR*

>peptide 3 (32 aa)
MKCQQFRFLHFPGTKLVAYAHALLATGSATWS*

>peptide 4 (30 aa)
QVGQMILQGKVDPDLRQVVLHRLCIPQQIP*

>peptide 5 (29 aa)
MAHRQWITSSSRFLAKVSGSADSPAVSHP*

>peptide 6 (72 aa)
MHQALPIGCGSPQAHGFWQRSRGLQIVQQCPIRSRLGIHQSSRMEFARRMVPSILDGQGHTCFVICSRSVSA*

>peptide 7 (73 aa)
MYAISEMYLPYAFWGTFDGAPHGDTATTKAANLSDELIRWLQSSLAGKGGLLDSRGCHDYVFLSEMRVVLFRL*

Sequence

>CNT30648173
CCAAGTGGGTCAAATGATCCTCCAGGGTAAAGTGGATCCAGACCTTCGCCAAGTGGTCCTCCACCGACTCTGTATCCCTCAACAAATCCCATGAGGACAA
CTTGGACAGCCCAGATTGCTAAAATGCTCTGGGCATGGACAAGGTTTGGGTTGCCAAGATAGTCAAGGCCGCCCTCTGAAAAGATTTGGGACCCGGCCTT
GAACCAAACAGCCTCACCGAACTTGACACCATTCTTGGACAAGACTTCTGGGAAGACGCAGCCCAATGCACCAAGCATTGCCCATCGGCTGTGGATCACC
TCAAGCTCACGGTTTTTGGCAAAGGTCTCGGGGTCTGCAGATAGTCCAGCAGTGTCCCATCCGTAGTCGCCTGGGAATTCACCAGTCAAGTAGGATGGAG
TTTGCTCGGAGAATGGTCCCAAGTATTTTGGACGGTCAGGGCCATACCTGTTTTGTCATTTGCAGTCGAAGTGTGTCAGCATAAGCTCAAGCTCTTGACT
TCAAAGATGAAATGCCAGCAATTTAGGTTTCTTCACTTCCCGGGGACAAAGTTGGTAGCGTATGCCCATGCATTGTTGGCCACGGGATCAGCAACGTGGT
CATAGAGGTTCTCAATTGGCCCCTTTCCGGTAACAATTGCCTGAACAAAGAAACCGAACATGGAGGTCATTGCCAGTCTTCCATTCTTGATTTCCTTCAC
CTTAAGCTCAGCAAAGGCTTCTGGGTCATCAGCCAATCCAAGTGGGTCAAAGGCACCTCCTGGGTAAAGTGGGTCAAGACCCTCACCCAGTGGGCCTCCA
CCAATTCTGTATCCCTCAATGAAGCCCATGAGGACAACCTGGACGGCCCAGATTGCCAGGATGCTCTGCGCGTGGACGAGGTTTGGGTTGCCGAGGTAGT
CCAGGCCACCCTCGGAGAAGATTTGAGACCCGGCCTTGAACCAAACAGCCTCGCCGAACTTGACACCGTTCTTGGACAAGACTTCTGGGAAGACGCAGCC
CAATGCACCAAGCATGGCCCATCGGCAGTGGATCACCTCGAGCTCACGGTTCTTAGCAAAGGTTTCGGGGTCTGCCGATAGCCCAGCAGTGTCCCATCCG
TAGTCACCGGGGAATTCTCCGGTCAAGTAGGAAGGAGTTTGCTCGGAGAATGGTCCCAAGTATTTTGGGCGGTCTGGACCGTACCTATTTTGTTAAGCAC
ATGTAAGTATGTCGGCATTGAAAGAAAGATATGGATGTGAGATTCAATTATTAACCTTGGTCTTATGTAATTTGATTATTAGAATAGACTAGAGGATTCA
TATGCAATCTCTTAAATCCATACTTGTCAGGTGATCTCATAGATCGAAACAATAATCAAATTATAGTCATTTCAATTATAACTTTGGATGTTAGATCATA
GCATAGTTCGATTATAGTCATTTCAATGAAGTTTTACTAGTGACTATAATTTCACGCAATTATATTTAGCCAAAGATCACATTTACTAGGGAGTAGTGAC
CAAGTCAAATGTATGCAATTTCAGAAATGTACTTACCATATGCTTTCTGGGGCACTTTTGACGGTGCGCCTCATGGAGATACGGCCACCACCAAGGCCGC
CAATCTTTCGGACGAGCTCATTCGATGGCTTCAAAGCAGTCTGGCCGGCAAAGGCGGATTGCTGGATAGCAGAGGTTGCCATGACTATGTGTTTCTCTCT
GAGATGAGGGTGGTGTTGTTTAGGCTATGAAATGAAG