Detailed information on CNT30616538


BLAST search results

BLAST vs Swiss-Prot:
sp|P27494|CB23_TOBAC, E-value = 9e-71

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378910Sesamum indicumManihot esculenta49.0820.7985.89241forward
CNT30488808Sesamum indicumOlea europaea41.7539.2786.34205forward
CNT30506346Sesamum indicumNicotiana attenuata50.3180.1982.59247forward
CNT30560173Sesamum indicumActinidia chinensis40.1221.8485.28197forward
CNT30234046Sesamum indicumBrassica oleracea39.5133.5181.96194forward
CNT30313266Sesamum indicumCamelina sativa32.7926.7484.47161forward
CNT30716010Sesamum indicumMalus domestica golden24.8521.0387.7122forward
CNT30625449Sesamum indicumDaucus carota37.472083.7184forward

Expression of CNT30616538

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVNRPPALTLPTFLISSFWGFKAVCPPNADC*

>peptide 2 (38 aa)
GRSCRVPLQVGLLRLCILRRNPSTRLGRPRWPRCSVRG*

>peptide 3 (99 aa)
VDLVESLSKWASSDSVSFDETHQHDLAGPDGQDALCVDEIWAPALNHTASPNLTPFLDRISGKTQPNAPSMAQRQWITSSSRFLANVSGSADSPAVSQP*

Sequence

>CNT30616538
GGTAGATCTTGTCGAGTCCCTCTCCAAGTGGGCCTCCTCCGACTCTGTATCCTTCGACGAAACCCATCAACACGACTTGGCAGGCCCAGATGGCCAAGAT
GCTCTGTGCGTGGATGAGATCTGGGCTCCGGCCTTGAACCACACGGCCTCTCCGAATTTGACCCCATTCTTGGACAGGATCTCTGGGAAAACGCAACCCA
ATGCACCAAGCATGGCCCAACGGCAGTGGATCACCTCAAGCTCACGGTTCTTAGCGAATGTCTCGGGATCAGCCGACAGCCCTGCAGTGTCCCAACCATA
ATCTCCAGGGAATTCACCAGTAAGATGCTCTGAGGAGCGCTCTTGACAGTACGTCTCATGGTGAACCGGCCTCCGGCACTGACGTTGCCGACCTTCCTGA
TCAGCTCATTCTGGGGCTTCAAAGCCGTCTGCCCACCAAATGCAGATTGCTGAAACGCTGAAGTTGCCATTTTCAACAGTTTTTTTCTTTG