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Detailed information on CNT30326027


BLAST search results

BLAST vs Swiss-Prot:
sp|P12332|CB21_SILLB, E-value = 1e-81

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512563Asparagus officinalisJuglans regia59.9322.5583.87341forward
CNT30701229Asparagus officinalisQuercus lobata59.9317.5481.82341forward
CNT30379168Asparagus officinalisManihot esculenta59.9329.6584.16341forward
CNT30631092Asparagus officinalisVigna unguiculata59.9330.1581.82341forward
CNT30488808Asparagus officinalisOlea europaea42.5346.3684.3242forward
CNT30708305Asparagus officinalisGlycine max53.953882.08307forward
CNT30561789Asparagus officinalisActinidia chinensis60.1130.784.5342forward
CNT30234046Asparagus officinalisBrassica oleracea57.2956.381.6326forward
CNT30313761Asparagus officinalisCamelina sativa50.0934.0984.21285forward
CNT3077068Asparagus officinalisBrassica juncea62.3934.9882.82355forward
CNT30612591Asparagus officinalisArabis alpina51.6736.8482.99294forward
CNT30605341Asparagus officinalisGossypium raimondii59.9331.2682.4341forward
CNT30648173Asparagus officinalisRosa chinensis59.9319.6385.04341forward
CNT30625449Asparagus officinalisDaucus carota38.3123.785.32218forward
CNT30480205Asparagus officinalisArabidopsis halleri57.4743.3181.65327forward
CNT30360562Asparagus officinalisLactuca sativa60.1137.5482.75342forward
CNT30410959Asparagus officinalisPapaver somniferum48.3330.9383.27275forward
CNT3028352Asparagus officinalisTheobroma cacao48.8630.0583.45278forward
CNT30119392Asparagus officinalisCitrus clementina54.6633.8482.96311forward
CNT3035896Asparagus officinalisCucumis melo50.9732.2282.76290forward
CNT30112551Asparagus officinalisFicus carica51.4947.3384.64293forward
CNT3040143Asparagus officinalisMarchantia polymorpha51.495082.94293forward

Expression of CNT30326027

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MRGFALRMGRGIWDGPVHTYALRSALDSPAHGEAAIAGGANLANELVRGLEGGLAGES*

>peptide 2 (50 aa)
MVKRPLPEGPTLRTSSFGALRAVWPAKADAEAAIDEPKLTAELNERWWRL*

Sequence

>CNT30326027
CAGGCCCAGATGGCTAGAATGCTCTGGGCATGGACCAGGTTAGGGTTTCCCAGATAGTCGAGACCGCCCTCTGAGAAGATTTGTGAGCCGGCCTTGAACC
AGACGGCTTCACCAAACTTGACGCCGTTCTTGGCAAGGACTTCAGGGAAGACGCAGCCAAGAGCGCCGAGCATTGCCCATCGGCAGTGGATCACCTCGAG
CTCACGGTTCTTGGCGAAGGTCTCTGGGTCAGCAGAGAGACCGGCAGTGTCCCATCCATAGTCACCGGGGAATTCACCGGTTAGGTATGAGGGGGTTTGC
TCTGAGAATGGGCCGAGGTATTTGGGACGGTCCGGTCCATACCTATGCTCTGAGGAGCGCTCTTGACAGTCCGGCGCATGGTGAAGCGGCCATTGCCGGA
GGGGCCAACCTTGCGAACGAGCTCGTTCGGGGCCTTGAGGGCGGTCTGGCCGGCGAAAGCTGATGCAGAGGCTGCCATTGATGAACCGAAGCTAACTGCG
GAGCTGAATGAGAGGTGGTGGAGGCTCTGAAACAAGGAAGAGGTTTATGTAGGGAGAGCGAGGGGGTGG