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Detailed information on CNT30313266


BLAST search results

BLAST vs Swiss-Prot:
sp|P14279|CB25_SOLLC, E-value = 2e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616538Camelina sativaSesamum indicum26.7432.7984.47161forward
CNT30268034Camelina sativaChenopodium quinoa15.2837.193.4892forward
CNT30378978Camelina sativaManihot esculenta39.720.8481.59239forward
CNT30630954Camelina sativaVigna unguiculata49.1751.382.09296forward
CNT30488808Camelina sativaOlea europaea42.1948.6680.71254forward
CNT30708305Camelina sativaGlycine max43.0232.0583.78259forward
CNT30539464Camelina sativaBrassica napus30.565092.93184forward
CNT3074696Camelina sativaBrassica juncea42.6950.9990.27257forward
CNT3028352Camelina sativaTheobroma cacao41.6927.1483.27251forward
CNT30119335Camelina sativaCitrus clementina42.1938.683.07254forward
CNT30331118Camelina sativaDioscorea rotundata26.7427.5283.85161forward
CNT3040151Camelina sativaMarchantia polymorpha66.4535.2181.5400forward

Expression of CNT30313266

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MSQGQLRVQQCPSRSLLGTLRLGTTVCSPRMDPSTWDDALRSRLDGTTHSHTATTRDTNLAEEVVGRLEG

>peptide 2 (29 aa)
QVHIIHSRGYKGREIMKQIQMIITVRGQS*

>peptide 3 (35 aa)
MGPLPVTMAWTKNPNMENMARRPFLSSFTFSSEKI*

>peptide 4 (29 aa)
MAHLLWITSSSRFLANVSGSAESPAVSQP*

Sequence

>CNT30313266
CAAGTTCACATAATACATTCACGAGGTTACAAAGGTAGAGAGATTATGAAGCAAATACAAATGATAATTACTGTCCGGGGGCAAAGTTAGTAGCGTAAGA
CCAGGCATTGTTAGCCACAGGATCAGCCAAGTGATCAAACAAGTTCTCAATGGGACCTTTACCAGTGACAATGGCTTGGACAAAGAATCCAAACATGGAG
AACATGGCAAGACGACCGTTCTTGAGCTCCTTCACCTTCAGCTCAGAGAAGATCTGAGAGCCTGCTTTGAACCAAACGGCTTCTCCGAATTTGACACCGT
TCTTGGAGAGGATCTCAGGGAATGTGCAGCCGAGAGCACCCAACATGGCCCATCTGCTGTGGATCACTTCAAGCTCACGGTTCTTAGCGAATGTCTCAGG
GTCAGCTGAGAGTCCAGCAGTGTCCCAGCCGTAGTCTCCTGGGTACTCTCCGGTTAGGTACGACGGTGTGTTCTCCGAGAATGGACCCAAGTACTTGGGA
CGATGCTCTGAGGAGTAGACTTGACGGTACGACGCATAGTCACACGGCCACCACCAGAGACACCAACCTTGCGGAGGAGGTCGTTGGAAGGCTTGAGGGC
CG