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Detailed information on CNT30172058


BLAST search results

BLAST vs Swiss-Prot:
sp|P27520|CB215_PEA, E-value = 2e-85

BLAST vs NONCODE:
NONSTUT002515, E-value = 3e-53

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512563Trifolium pratenseJuglans regia28.9429.0384.97439forward
CNT30526271Trifolium pratensePhaseolus vulgaris14.0431.9888.73213forward
CNT30631092Trifolium pratenseVigna unguiculata28.9438.8288.61439forward
CNT30488808Trifolium pratenseOlea europaea17.3450.3884.41263forward
CNT3085816Trifolium pratenseVigna radiata24.7258.7887.73375forward
CNT30234046Trifolium pratenseBrassica oleracea25.6467.1878.41389forward
CNT30605341Trifolium pratenseGossypium raimondii29.1440.5186.65442forward
CNT30409824Trifolium pratensePapaver somniferum27.1661.3182.52412forward
CNT30572302Trifolium pratenseVitis vinifera10.5523.1587.5160forward
CNT3028352Trifolium pratenseTheobroma cacao19.0531.2484.78289forward
CNT3022417Trifolium pratensePopulus trichocarpa9.4956.0386.11144forward
CNT3035896Trifolium pratenseCucumis melo19.3132.5683.62293forward

Expression of CNT30172058

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MAFGSSPSKLRIFVTMFLRDMMRHKSVKNQNILNFFDCN*

>peptide 2 (33 aa)
KFEFCRKQSFCATKMLKGTICFFQQTKHKQSMV*

>peptide 3 (33 aa)
MVTNHLISLNTFMPFSCANLFILNTNLCVITFK*

>peptide 4 (68 aa)
MDQVWVAQIVKATLREDLGTSLKPDCLAEFNTILFKDFREGTSQCSKHSPSAVNYFKLTVLCKSFRVS*

Sequence

>CNT30172058
ACAAATTTGAATTCTGCAGGAAGCAGAGTTTTTGTGCAACCAAAATGCTAAAAGGAACAATTTGTTTTTTCCAACAAACAAAACATAAACAATCAATGGT
GTAGTGAATTTTTTTTATTTTTTTTTTGCTTCTCATTTGACCTATCTAGGTGTATGGTTACCAACCACCTGATTAGTTTGAACACATTCATGCCTTTTTC
GTGTGCAAACTTATTCATACTAAATACCAATCTTTGTGTAATTACATTTAAGTAGTTGATGTTTTTTGACAAATTTTAGTAGTTGAACTGGTTGCATTAT
TTAAACTAATTATTATGGGAGATTAAATAAAAGCATATGACTAACACAGCTCAATCAATATTCTGAATTCATGCACAAGAGTTGACATTTCTTAGGATCC
ATATTTCTAACATATAATCAGCCACATACAGGTTCTGCTTGTGTAATTACATTGGTGAAAATAGAAGTTAAACTCAACACAAATGCAAATGAGAGCAGAA
GATTGCAGCTGAAGAGGCAGCCATATCTTGGCATTCTTATTGTCCGGGGACGAAGTTAGTAGCATATGCCCATGCGTTGTTGGCGACAGGGTCAGCAAGA
TGGTCGTAAAGGCACCACCAGGGTAAAGTGGGTCTAATCCTTCACCAAGTGGTCCTCCACCAATTCTGTAACCTTCAACGAATCCCATGAGCACAACCTG
AGTAGCCCAGATTGCAAGAATGCTTTGAGCATGGATCAAGTTTGGGTTGCCCAAATAGTCAAGGCCACCCTCAGAGAAGATCTGGGCACCAGCCTTAAAC
CAGACTGCCTCGCCGAATTTAACACCATTCTTTTCAAGGATTTCAGGGAAGGTACATCCCAATGCTCCAAGCATAGCCCATCTGCTGTGAATTACTTCAA
GCTCACGGTTCTTTGCAAAAGTTTCAGGGTCAGCTGATAAGCCAGCTGTGTCCCATCCGTAGTCACCAGGGAATTCACCAGTCAGGTATGATGGAATTTG
TTCTGAGAATGGACCCAAGTACTTGGGTCTGTCAGGGCCATACCTGATTTTAACAACAGATCATACCAAGTTAAATACAGAAACAAATTATCACAACCTT
ACTTCAAATGTTAGCACAGGATGTTGCATTTGATTAGACCTTTACAAGACAAGATGATAACTATTAACTATAAGCTATGAAGCACAAATACACGGACACT
TCCACACCGATAATAATGTGAGAAAATAACATAATTCAATGTAATCATATATGTTGGTGTCGTGTTACGTGTCTGACACGACCTAATTCAAGGAGTGTCC
GTGATTCATAAATTATAGTCTATAAGCAGTTATATCACCAGTTAGTTATTAACATTTGATTTAATCTATTACATTACACATGCATAATCTATGGCTTTTG
GGTCTTCCCCATCTAAGCTAAGAATTTTTGTTACTATGTTCTTAAGAGACATGATGAGACATAAGAGTGTTAAAAACCAAAACATTTTGAATTTTTTTGA
CTGTAATTGAACTACTT