Detailed information on CNT30436586


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695011Aegilops tauschiiOryza sativa85.6577.8796.45197forward
CNT30672141Aegilops tauschiiSetaria viridis57.8318.8194.74133forward
CNT30520455Aegilops tauschiiSetaria italica77.3933.4696.07178forward
CNT30221764Aegilops tauschiiHordeum vulgare66.9654.0498.05154forward
CNT30386161Aegilops tauschiiTriticum turgidum81.7430.9298.94188forward
CNT30244600Aegilops tauschiiAvena sativa98.796.696.92227forward
CNT30659042Aegilops tauschiiTriticum dicoccoides85.6567.2499.49197forward
CNT30612607Aegilops tauschiiArabis alpina68.729.3182.28158forward
CNT30132533Aegilops tauschiiLolium perenne98.2691.1396.46226forward
CNT3013862Aegilops tauschiiZea mays56.9618.7791.6131forward
CNT30681359Aegilops tauschiiTriticum urartu83.9126.7798.96193forward
CNT30339489Aegilops tauschiiEragrostis tef56.527.6483.08130forward
CNT30477381Aegilops tauschiiArabidopsis halleri49.5738.3884.21114forward
CNT30370710Aegilops tauschiiOryza glumipatula71.341.5294.51164forward
CNT3053136Aegilops tauschiiAmborella trichopoda62.1732.583.92143forward
CNT3038710Aegilops tauschiiCucumis melo71.351.5781.1164forward
CNT30102835Aegilops tauschiiOryza rufipogon27.395.9488.8963forward
CNT30577305Aegilops tauschiiOryza barthii27.396.9288.8963forward
CNT30580975Aegilops tauschiiEchinochloa crusgalli77.3974.4896.07178forward
CNT30117266Aegilops tauschiiOryza nivara60.4338.597.12139forward
CNT30604463Aegilops tauschiiOryza punctata22.614.4390.3852forward
CNT30556637Aegilops tauschiiPanicum hallii73.9177.6395.29170forward
CNT30725037Aegilops tauschiiLupinus angustifolius60.8716.3480140forward

Expression of CNT30436586

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MGMSSTMKRVVVSVKYSCSPAVYHDGVLRMPILVRSSGMKMPAAPSIAHRQCTSSACTFHRKLSG

>peptide 2 (75 aa)
AGVGEVSEEIVDGDELHDEEGGGVGEVLLLPGGVPRRRVEDADLGQELRDEDARRAQHRPPAVHQLRLHVPPQALR

Sequence

>CNT30436586
GGCCGGGGTCGGCGAGGTGAGCGAAGAGATTGTCGATGGGGATGAGCTCCACGATGAAGAGGGTGGTGGTGTCGGTGAAGTACTCCTGCTCCCCGGCGGT
GTACCACGACGGCGTGTTGAGGATGCCGATCTTGGTCAGGAGCTCCGGGATGAAGATGCCCGCCGCGCCCAGCATCGCCCACCGGCAGTGCACCAGCTCC
GCCTGCACGTTCCACCGCAAGCTCTCCGGG