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Detailed information on CNT30659042


BLAST search results

BLAST vs Swiss-Prot:
sp|P10708|CB12_SOLLC, E-value = 4e-64

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695011Triticum dicoccoidesOryza sativa70.6581.8296.62207forward
CNT30520455Triticum dicoccoidesSetaria italica63.4834.9695.7186forward
CNT30436586Triticum dicoccoidesAegilops tauschii67.2485.6599.49197forward
CNT30244600Triticum dicoccoidesAvena sativa69.9787.2396.1205forward
CNT30612607Triticum dicoccoidesArabis alpina64.1634.8881.38188forward
CNT30131664Triticum dicoccoidesLolium perenne69.6283.9595.59204forward
CNT30339489Triticum dicoccoidesEragrostis tef45.057.7683.33132forward
CNT30370710Triticum dicoccoidesOryza glumipatula44.7133.1694.66131forward
CNT3038710Triticum dicoccoidesCucumis melo63.1458.1881.62185forward
CNT30102835Triticum dicoccoidesOryza rufipogon22.186.1389.2365forward
CNT30577305Triticum dicoccoidesOryza barthii22.187.1489.2365forward
CNT30580975Triticum dicoccoidesEchinochloa crusgalli63.4877.8295.7186forward
CNT30117266Triticum dicoccoidesOryza nivara47.4438.597.12139forward
CNT30604463Triticum dicoccoidesOryza punctata22.185.5487.6965forward
CNT30556637Triticum dicoccoidesPanicum hallii60.7581.2894.94178forward

Expression of CNT30659042

Peptides detected in this lncRNA

>peptide 1 (96 aa)
VPDVGADGVRVDAAGLDDVCPPAALGPADEDELHDEEGGGVGEVLLLPGGVPRRRVEDADLGQELRDEDARRAQHRPPAVHQLRLHVPPQALRVGSY

>peptide 2 (96 aa)
YPTSVPMGSVLTQPGLMMSAHRRPSAQPMRMSSTMKRVVVSVKYSCSPAVYHDGVLRMPILVRSSGMKMPAAPSIAHRQCTSSACTFHRKLSGSDPT

Sequence

>CNT30659042
GTACCCGACGTCGGTGCCGATGGGGTCCGTGTTGACGCAGCCGGGCTTGATGATGTCTGCCCACCGGCGGCCCTCGGCCCAGCCGATGAGGATGAGCTCC
ACGATGAAGAGGGTGGTGGTGTCGGTGAAGTACTCCTGCTCCCCGGCGGTGTACCACGACGGCGTGTTGAGGATGCCGATCTTGGTCAGGAGCTCCGGGA
TGAAGATGCCCGCCGCGCCCAGCATCGCCCACCGGCAGTGCACCAGCTCCGCCTGCACGTTCCACCGCAAGCTCTCCGGGTCGGATCCTACAC