Detailed information on CNT3037432


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692523Cucumis meloOryza sativa52.6217.8586.26211forward
CNT30519701Cucumis meloSetaria italica44.8913.2582.78180forward
CNT3020926Cucumis meloCitrullus lanatus62.3435.8794250forward
CNT30185311Cucumis meloSecale cereale41.411.882.53166forward
CNT30139766Cucumis meloLolium perenne27.1822.2483.49109forward
CNT30347748Cucumis meloEragrostis tef44.1425.3980.79177forward
CNT30369978Cucumis meloOryza glumipatula52.6228.185.78211forward
CNT30575497Cucumis meloOryza barthii44.8914.3587.22180forward

Expression of CNT3037432

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MTVEKRTMTGVWTPGARRKSAQVKSEMSWVTSK

>peptide 2 (83 aa)
HKPLMMIIMVRTLRSINRQLKIVRTKSMPLCIRIRKAPCLQHLIIRIMYPRHGLLQGIAWHHERRRPGSCCRLNRSCLHACRI*

Sequence

>CNT3037432
CATAAACCCCTCATGATGATTATTATGGTGAGGACACTTAGGAGCATTAACAGGCAACTGAAGATAGTTAGGACCAAGTCTATGCCTCTGTGTATCCGCA
TACGCAAAGCTCCTTGCTTGCAACATCTTATCATCCGAATAATGTATCCCCGGCACGGATTACTTCAGGGAATTGCATGGCATCACGAACGAAGAAGACC
GGGAAGTTGTTGCCGACTAAATCGAAGTTGCCTTCACGCGTGTAGAATTTGACGGCGAATCCACGGGGGTCACGGAGGGTTTCGGGGCTGCCCCGTTCGT
GGATGACGGTGGAGAAACGGACGATGACGGGGGTTTGGACGCCTGGGGCACGGAGGAAGTCGGCGCAGGTTAAGTCGGAGATGTCGTGGGTTACTTCGAA
G