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Detailed information on CNT30575497


BLAST search results

BLAST vs Swiss-Prot:
sp|B8AME2|CATA3_ORYSI, E-value = 2e-180

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692473Oryza barthiiOryza sativa49.7650.6197.44624forward
CNT30678563Oryza barthiiSetaria viridis13.2479.0590.36166forward
CNT30519927Oryza barthiiSetaria italica32.4623.7288.94407forward
CNT30377107Oryza barthiiArabidopsis thaliana14.0437.2183.52176forward
CNT30616919Oryza barthiiSesamum indicum10.2139.6384.38128forward
CNT3020926Oryza barthiiCitrullus lanatus14.3525.8288.33180forward
CNT30185318Oryza barthiiSecale cereale21.0519.2887.12264forward
CNT30295853Oryza barthiiTriticum aestivum18.9835.4294.96238forward
CNT30223857Oryza barthiiHordeum vulgare9.4947.2292.44119forward
CNT30563752Oryza barthiiActinidia chinensis11.8830.685.91149forward
CNT30592095Oryza barthiiMusa acuminata15.9567.885.5200forward
CNT30552704Oryza barthiiOryza glaberrima10.9347.2489.78137forward
CNT30243876Oryza barthiiAvena sativa17.9429.8886.67225forward
CNT30663726Oryza barthiiTriticum dicoccoides25.2838.3394.32317forward
CNT30260467Oryza barthiiBrassica rapa16.6750.1282.78209forward
CNT30139766Oryza barthiiLolium perenne15.7140.287.82197forward
CNT302263Oryza barthiiZea mays30.1433.8491.01378forward
CNT30228927Oryza barthiiAnanas comosus16.1985.6588.67203forward
CNT30347744Oryza barthiiEragrostis tef34.8527.9185.58437forward
CNT30369978Oryza barthiiOryza glumipatula53.8389.8896.74675forward
CNT3037432Oryza barthiiCucumis melo14.3544.8987.22180forward

Expression of CNT30575497

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MIPGQNASCSFSEKKLSMLRLSTILPTGCSGTMSSGHVLVTSSGSKSKRSSWSGSMVWMKSFHSGKLPAAMES*

>peptide 2 (68 aa)
MPMSSKRKVNMWRLSGWWEKKSRMRQFSWTCDLGLGLSECTMSGNFMPSRMKKTGKLLPTRSQLPSRV*

>peptide 3 (40 aa)
MAKPRGSRRVSGLPRSWMTVEKRTMTGVWTPGARRKSAQVR

Sequence

>CNT30575497
CCCGATCGATCAAAACCAGTTAATAAATTGACTAGCTATTACTACTTCCTCGTTTCAGATTATAAATCGTTTTAACTTTGATAGTTTAATTTTAAATTTA
ACTAAGTTTATATAAAAAATAGTAACATTTTTAACCCATAACAAATATATTGAACTATAGATTTAATGAAACTAATTTGGTGTTGTAATTATTACTATAT
TTATCTATAAACTTAGTTAAACTTATAGTTTGAGATTGACTAAAATTAAAACGTCTTATAATCTGAAACGGGGGAAGTAGTAATTAAGAAAGAAAATATA
GTGAAATGTAAAACCCAAACGCAAATCAATCAACAGAATTACCTTCTCGCGGCGGCCGGTGAGGGTGGCGGAGGGGATGGGGTAGCGGGGGGCGTGCTTG
GCAGGATCGTAGCGGGATGGGAAGTAGTCGACCTCCTCGTCGCGGTGCATGAAGTTCATGAAGCCGTCGTAGTGGTTGTTGTGGTGGGCGCACTTGGGCG
CGTTGGGCGGGAGCAGCAGGAGAAGATCCTCGTCTGCAGCAGCTTGTCGTCGGAGTAGTAGATCCCCGGCACGATGATCCCGGGGCAGAACGCCAGCTGC
TCGTTCTCCGAGAAGAAGTTGTCGATGTTGCGGTTGAGCACCATCCTCCCCACGGGCTGCAGCGGCACGATGTCCTCGGGCCACGTCTTGGTGACGTCCA
GCGGGTCGAAGTCGAAGCGGTCCTCGTGGTCGGGGTCGATGGTCTGGATGAAGAGCTTCCACTCCGGGAAGTTGCCGGCGGCGATGGAGTCGTAGAGCAG
CGACTTGACGCCGCAGGTGGGCTTCCAGTGGAACTTGACGTAGTGCGACTTGCCGGCGCGGTTGACGAGCGTGTAGGTGTTGACGCCGGAGCCGTCCATG
TGGCGGTAGTCGGCGGGGATGCCGATGTCGTCGAAGAGGAAGGTGAACATGTGGAGGCTCTCCGGGTGGTGGGAGAAGAAGTCGAGGATGCGCCAGTTCT
CCTGGACGTGCGACTTGGGGTTGGGCTTGAGCGAGTGCACCATGTCCGGGAACTTCATGCCGTCGCGGATGAAGAAGACGGGGAAGTTGTTGCCGACGAG
GTCCCAGTTGCCCTCCCGGGTGTAGAACTTGATGGCGAAGCCACGCGGGTCGCGGAGGGTCTCCGGGCTGCCGCGCTCGTGGATGACGGTGGAGAAGCGG
ACGATGACCGGGGTCTGGACGCCCGGGGCGCGGAGGAAGTCGGCGCAGGTGAGG