SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 3407 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30510390 Solanum lycopersicum 8:47603858-47608327 (-) noncoding (-0.06144)- 64 3.49 3
CNT30510389 Solanum lycopersicum 8:42823138-42824274 (+) noncoding (-0.0057344)- 35 3.61 1
CNT30510388 Solanum lycopersicum 8:23902328-23908165 (-) coding (0.022)- 61 6.11 3
CNT30510387 Solanum lycopersicum 8:52345555-52346892 (-) noncoding (-0.065536)- 57 1.51 1
CNT30510386 Solanum lycopersicum 7:15559853-15581428 (-) noncoding (-0.0004096)- 42 0 2Conserved counterparts:
CNT30510384 Solanum lycopersicum 7:49628427-49640326 (+) noncoding (-0.08192)- 90 18.94 5
CNT30510383 Solanum lycopersicum 7:34915650-34921824 (+) noncoding (-0.0004096)- 45 23.75 3
CNT30510382 Solanum lycopersicum 7:920038-921833 (-) noncoding (-0.0004096)- 50 35.27 2Conserved counterparts:
CNT30510381 Solanum lycopersicum 7:1989257-1990880 (-) noncoding (-0.028672)4e-30 (sp|P01076|MCPI_SOLLC) 57 202.7 2
CNT30510380 Solanum lycopersicum 7:28455962-28460240 (-) noncoding (-0.14336)- 54 3.6 1
CNT30510379 Solanum lycopersicum 7:55579095-55585943 (-) noncoding (-0.065536)- 46 49.57 2
CNT30510378 Solanum lycopersicum 7:20652094-20655295 (-) noncoding (-0.053248)- 99 5.23 2
CNT30510377 Solanum lycopersicum 7:57065457-57067343 (+) noncoding (-0.0827392)- 75 62.63 1
CNT30510376 Solanum lycopersicum 7:19282662-19289771 (-) coding (0.03)- 57 21.28 2
CNT30510375 Solanum lycopersicum 7:29786484-29789497 (+) noncoding (-0.0004096)- 82 3.05 2
CNT30510374 Solanum lycopersicum 7:9902405-9908809 (+) coding (0.026)- 84 8.95 2
CNT30510372 Solanum lycopersicum 7:90851-91351 (+) noncoding (-0.0004096)5e-44 (sp|P20431|PMA3_ARATH) 35 14.36 2
CNT30510371 Solanum lycopersicum 7:55999829-56002100 (-) noncoding (-0.024576)- 46 2.56 2
CNT30510370 Solanum lycopersicum 7:4687099-4688494 (-) noncoding (-0.004096)- 79 5.82 4
CNT30510369 Solanum lycopersicum 7:8092672-8097672 (-) noncoding (-0.0094208)- 38 83.32 2
CNT30510368 Solanum lycopersicum 7:37703304-37704178 (+) noncoding (-0.077824)3e-31 (sp|P31843|RRPO_OENBE) 78 1.39 1
CNT30510366 Solanum lycopersicum 7:28240745-28250953 (+) noncoding (-0.0147456)- 86 3.36 1
CNT30510365 Solanum lycopersicum 7:64979212-64979689 (-) noncoding (-0.0004096)- 47 21.64 1
CNT30510364 Solanum lycopersicum 7:896056-896558 (-) noncoding (-0.01024)- 78 21.42 2
CNT30510363 Solanum lycopersicum 7:24963793-24965658 (+) noncoding (-0.294912)- 46 4.89 2
CNT30510361 Solanum lycopersicum 7:63446403-63446847 (-) noncoding (-0.0004096)- 48 27.89 2
CNT30510360 Solanum lycopersicum 7:52543720-52544247 (-) coding (0.107)- 86 3.65 2
CNT30510359 Solanum lycopersicum 7:920038-926902 (-) noncoding (-0.0004096)- 84 19.42 2Conserved counterparts:
CNT30510358 Solanum lycopersicum 7:2651082-2651329 (-) noncoding (-0.0004096)- 34 16.74 1
CNT30510357 Solanum lycopersicum 7:48331567-48350663 (-) noncoding (-0.032768)6e-27 (sp|P31843|RRPO_OENBE) 98 3.89 3
CNT30510356 Solanum lycopersicum 7:66536937-66538082 (-) noncoding (-0.0282624)2e-52 (sp|P0CG83|UBIQP_HORVU) 91 743.21 2Conserved counterparts:
CNT30510355 Solanum lycopersicum 7:7523243-7524146 (+) noncoding (-0.04096)- 39 18.92 2
CNT30510353 Solanum lycopersicum 7:56658684-56660996 (+) noncoding (-0.028672)2e-30 (sp|I1Z695|EREC2_ORYSJ) 82 14.84 1
CNT30510351 Solanum lycopersicum 7:64616402-64617747 (+) noncoding (-0.106496)- 66 15.27 2
CNT30510350 Solanum lycopersicum 7:63129923-63130240 (+) noncoding (-0.0004096)- 41 13.34 1
CNT30510349 Solanum lycopersicum 7:4037259-4044941 (+) noncoding (-0.049152)- 56 2.21 3Conserved counterparts:
CNT30510348 Solanum lycopersicum 7:9723046-9776699 (+) noncoding (-0.155648)- 57 8.53 2Conserved counterparts:
CNT30510347 Solanum lycopersicum 7:15568870-15611878 (-) noncoding (-0.077824)- 45 1.52 2Conserved counterparts:
CNT30510346 Solanum lycopersicum 7:61242550-61243122 (-) noncoding (-0.137626)- 76 42.05 2
CNT30510345 Solanum lycopersicum 7:9799121-9819888 (-) noncoding (-0.475136)- 94 8.54 2
CNT30510344 Solanum lycopersicum 7:20506808-20514794 (+) noncoding (-0.0303104)- - 2.15 2
CNT30510343 Solanum lycopersicum 7:23344006-23358236 (+) noncoding (-0.008192)- 65 31.14 3
CNT30510342 Solanum lycopersicum 7:59346263-59346733 (-) noncoding (-0.0004096)2e-18 (sp|Q8W034|RNP1_ARATH) 78 32.66 2
CNT30510341 Solanum lycopersicum 7:36276842-36278134 (+) noncoding (-0.0294912)- - 15.54 2
CNT30510340 Solanum lycopersicum 7:1207472-1208318 (-) noncoding (-0.0004096)0.000000000006 (sp|C0HK49|DEF_NICSU) - 31309.9 2Conserved counterparts:
CNT30510339 Solanum lycopersicum 7:56666433-56667380 (+) noncoding (-0.0274432)- 99 5.28 4Conserved counterparts:
CNT30510338 Solanum lycopersicum 7:40824034-40828705 (-) noncoding (-0.0004096)- 73 6.5 4
CNT30510337 Solanum lycopersicum 7:64961831-64963037 (-) noncoding (-0.152371)- 90 220.06 2Conserved counterparts:
CNT30510336 Solanum lycopersicum 7:4021441-4040887 (+) noncoding (-0.028672)- - 0.08 2Conserved counterparts:
CNT30510335 Solanum lycopersicum 7:63581551-63584278 (+) noncoding (-0.045056)1e-17 (sp|P92523|M860_ARATH) 76 9.32 1