CANTATAdb - search

Detailed information on CNT30515731

BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30546718	Juglans regia	Ipomoea triloba	61.61	98.51	83.14	528	forward
CNT30698491	Juglans regia	Quercus lobata	86.93	75.94	85.1	745	forward
CNT30272593	Juglans regia	Chenopodium quinoa	90.9	32.36	83.44	779	forward
CNT30572920	Juglans regia	Vitis vinifera	89.26	78.87	82.09	765	forward

Expression of CNT30515731

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVIVFPVSVLTKICIPPLKRRTKWRVDSFWML*

>peptide 2 (38 aa)
EATKHDHHEGEEQDAGCFPSGYCNLPVCDHPQAAFLQR*

>peptide 3 (84 aa)
KPLNTTTTKAKNKMQGAFLLDIVICQCATILKLLSCKDEPLLIRWDPLLVLNLSFHIVNGIRTFHLKCDCLARQRLHEYLHSTS*

>peptide 4 (37 aa)
MVSELSTSSVIVLPVSVFTNICIPPRRRRTRCRVLSF*

Sequence

>CNT30515731
GAAGCCACTAAACACGACCACCACGAAGGCGAAGAACAAGATGCAGGGTGCTTTCCTTCTGGATATTGTAATCTGCCAGTGTGCGACCATCCTCAAGCTG
CTTTCCTGCAAAGATGAGCCTCTGCTGATCAGGTGGGATCCCCTCCTTGTCTTGAATCTTAGCTTTCACATTGTCAATGGTATCAGAACTTTCCACCTCA
AGTGTGATTGTCTTGCCCGTCAGCGTCTTCACGAATATTTGCATTCCACCTCGTAGGCGAAGGACAAGATGTAGAGTGCTCTCTTTCTGAATGTTGTAAT
CTGCCAGGGTGCGGCCATCTTCAAGTTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCTGGTGGGATCCCCTCCTTATCCTGTATTTTGGCTTTGACATT
ATCAATCGTATCAGAGCTCTCCACCTCAAGGGTGATTGTCTTTCCTGTAAGAGTTTTAACAAAAATCTGCATACCACCCCTAAGGCGGAGAACCAGGTGG
AGTGTAGACTCCTTCTGAATATTATAATCAGCCAAAGTTCGGCCATCCTCGAGCTGCTTTCCCGCAAAAATCAGCCTCTGCTGATCTGGGGGAATTCCTT
CTTTGTCCTGAATTTTTGCCTTCACGTTATCAATGGTGTCGGAACTCTCAACTTCAAGAGTAATAGTCTTTCCGGTGAGCGTTTTGACAAAAATCTGCAT
CCCACCTCTCAAACGTAGAACCAAGTGGAGGGTGGATTCTTTCTGGATGTTATAATCAGCTAGAGTTCGGCCATCCTCGAGTTGCTTTCCAGCAAAGATA
AGCCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGTATTTTTGCTTTGACGTTA