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Detailed information on CNT3073617


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701438Brassica junceaQuercus lobata30.6470.9481.451035forward
CNT30525132Brassica junceaPhaseolus vulgaris33.9371.9480.891146forward
CNT30629220Brassica junceaVigna unguiculata26.2682.1382.86887forward
CNT30636316Brassica junceaCapsicum annuum33.8455.1482.411143forward
CNT30191758Brassica junceaSecale cereale31.8570.6584.291076forward
CNT3086353Brassica junceaVigna radiata30.748.3982.061037forward
CNT30541276Brassica junceaBrassica napus24.5162.63100828forward
CNT30145547Brassica junceaMedicago truncatula33.0156.0381.431115forward
CNT30312399Brassica junceaCamelina sativa33.9687.8387.011147forward
CNT3061502Brassica junceaArabidopsis lyrata11.9656.1992.08404forward
CNT30259491Brassica junceaBrassica rapa33.7258.351001139forward
CNT30217449Brassica junceaKalanchoe fedtschenkoi33.8175.6882.661142forward
CNT3066849Brassica junceaLeersia perrieri33.8485.5582.411143forward
CNT30623044Brassica junceaDaucus carota33.8457.9682.941143forward
CNT3028051Brassica junceaTheobroma cacao32.4789.9981.591097forward
CNT30324534Brassica junceaAsparagus officinalis31.3582.882.341059forward
CNT30603625Brassica junceaOryza punctata25.8766.6782.61874forward
CNT3066362Brassica junceaSelaginella moellendorffii26.1189.4583.11882forward

Expression of CNT3073617

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MQLHCQPPVLEATLSFRKKTLSTTCLRDHSINHLFEKLTQSDHLLLIKRLS*

>peptide 2 (44 aa)
METQAQLRLFSSHYNKHTPLVLQLLKLDEQTQENLENILQRMNR*

>peptide 3 (44 aa)
MSLCWSGGIPSLSWILALTLSMVSELSTSKVIVFPVRVLTKICI*

>peptide 4 (76 aa)
MKSRLLLDVVVGKSSSILQLLAGKDEPLLVRWDSLLILDLGLNVVDGIGAFNLQSDRLSGQSFNKDLHLKLKIKNN*

>peptide 5 (52 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSNVIVLPVRVFTKICMPPRSLRTK*

>peptide 6 (75 aa)
MLFGQFICVYISVCVLRRSQGCFIYGNASSAKVVLITLQQTHSVSITTLETRRTNTRKPREHSTENEPLIRFHRP*

>peptide 7 (52 aa)
MRRCWSGGIPSLSWILALTLSMVSELSTSSVMVLPVKVFTKICIPPRSLSTK*

>peptide 8 (30 aa)
MTKENEASMASGTVLDFTINLLFTSNPWHR*

>peptide 9 (31 aa)
MVSELSTSSVIVFPVKVLTKICMPPRRRKTK*

>peptide 10 (39 aa)
MTLFNMFFLIRSSKHSSFSVQNIVIHQGNELTNNVQEIT*

>peptide 11 (43 aa)
MCKRLRSVHSTEHVIWTVYLRLHKRLRSQTQPRLFHIWKRKLS*

Sequence

>CNT3073617
GTCTAAAAGCTTACTTCTTGATCGCCGGTTTATAGCTTTAGTTTAATTATGTTATTTTCGGGGATTTGAAGAAGTTTTATTGATTGACACGGAAACTACA
AATCAAGATGACGCTGTTCAACATGTTTTTCTTAATCAGGTCTTCCAAGCATAGTTCATTTTCGGTTCAGAACATTGTAATTCATCAAGGCAATGAGTTA
ACCAACAATGTGCAAGAGATTACGTAGTGTACATTCTACAGAACATGTTATTTGGACAGTTTATTTGCGTTTACATAAGCGTTTGCGTTCTCAGACGCAG
CCAAGGTTGTTTCATATATGGAAACGCAAGCTCAGCTAAGGTTGTTCTCATCACATTACAACAAACACACTCCGTTAGTATTACAACTCTTGAAACTCGA
CGAACAAACACAAGAAAACCTAGAGAACATTCTACAGAGAATGAACCGCTGATTCGATTTCACCGTCCATAGACTCAGCTATTTCTCTGAACGACTCGCT
ATGGAGATGCCTAGTGAAACTAGTAGTCGTGTCCAAGAAATAAAGAATCGACGACATCATACAGCATGTTCTGATTAATCCCCTTTGATTTGTTTGCGTC
TCTGATAAGAGTCATTTCTTTCAAACAAGAATCGTTTTGTTTGTGTAATATTCTGTCTTTTGAGTTTACACATTACAGAGCTTTCTCATTACCAGAGAAA
GCTAATCTACAGGAATCATCTTTCTCTTAAGCAACTTAAGCATTATAGGCAGCTAGGTGCGTAAGAACCACTTGAGAGGAGATTTGAGAAACTGTACTAT
CAACCATCTGTTTGAGAAATGTCTGGTGCTATCAAAGGCATAATGAGACTTGAAGCTAATTTCAAAAGCACATGAATGTAAGCAAAAGACGATAACAAAG
AGAGTGAATTACCAAACGTAAGAACCACTATTAACCATCTGTTGCTAAGGCATAATGAGAGTTGAAGCTATAGTTTCAAAGAGAACACATGACCAAAGAG
AATGAAGCCTCAATGGCCAGTGGAACAGTTTTAGATTTTACTATAAACCTTCTTTTCACCTCCAATCCGTGGCACAGATAAACAATAAGAACCACTTGAG
ACGAGTTATGCAATTACATTGTCAACCACCTGTTTTAGAAGCTACACTATCGTTCAGAAAAAAAACACTATCAACCACCTGTTTGAGAGACCATTCTATT
AACCATCTGTTTGAGAAACTAACACAATCAGACCACCTGTTGCTGATAAAGAGATTGAGCTAGTAAAGTAAAAGACAGTAACAAAGAGATGAAACTGTAA
GTTCCCTAAACTAAACCAAGAACCCTGAACCATACTCGAGCTTCCTCAAGCATACTCAAGCAGAGTGAGAATAGCCCTAAACCACTTTCATACATCAGCC
TCATTCAGGCTTAAGATTTCAGAGGTATAAGCCAAGTAAACAGGAGTTAAGCAAACGGCACAACATTATTAAACAGCAACCTCTCTCAGCTGAAAATTCT
CAATCGACTGTACTACACTAGCTTGCAAACAGCACAACATACAAAGCACAATAGGGAAAAGTAAAAAGCAACGGCTATTATATTTCACAATAGAGAAATC
CGATTTGGTTCACAAGGAAAGAGAAAACAAGGACGCAAGAGTTCATCAATTATTCATCAGAGGCTTTATAAAACCCCAAAACACAAACCATAAGTACTTT
ATAAAAGAAAACCAGATTCTAACTTTTAACCCGTAACAGGCGGAGAGTTTTAGATACCACCACGGAGACGGAGGACCAAGTGAAGTGTCGACTCCTTCTG
GATGTTGTAGTCTGCTAAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCTTGGATCTTG
GCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAGTGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAAATCTGCATACCACCACGAAGCCTGA
GTACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGAGTGCGACCATCCTCAAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCCGG
AGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCCAATGTGATAGTCTTGCCGGTAAGGGTCTTCACA
AAAATCTGCATGCCACCACGGAGCCTGAGGACCAAGTGAAGCGTAGACTCCTTCTGAATGTTGTAATCGGCCAAGGTCCTGCCATCTTCCAATTGCTTTC
CAGCGAAGATAAGCCTCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGGATTTTGGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAGCGT
GATCGTCTTTCCTGTCAAAGTCTTGACGAAGATTTGCATGCCTCCACGAAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATGTTGTAATCTGCC
AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCTTTGTCTTGGATCTTGGCTTTGACGTTGTCAA
TAGTGTCGGAGCTTTCAACCTCCAAAGTGATAGTCTTTCCCGTCAAAGTCTTAACGAAGATTTGCATACCACCACGGAGCCTGAGGACGAGATGAAGAGT
CGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTTCTTCCATCCTCCAACTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGGATTCCCTCCTTA
TCCTGGATCTTGGCCTTAACGTTGTCGATGGTATCGGAGCTTTCAACCTCCAAAGTGATCGTCTTTCCGGTCAGAGTTTTAACAAAGATCTGCATCTGAA
ATTAAAAATAAAAAATAATTAATATCAGTAATCAAAAACTCAAATCAATTTCACTAGTCAGATCGTACCGAAATTAATCAGATCCAACCATCGAATTCAA
CTATTTAAACCGAATTCTACAATCGAATCAAATCATCAATGAACCATTAAGATCAAACTGTGGATAGCAATCAATCACGGATCGACGCTTATCAACAGAG
ATCCACGACTATTAAGAATAACTAATCAGATCGCTAAAACACTAATCACATCCTACCAAGAAACAACAGATCGTGACGAACAAATACGACGACGGATCAA
ATTCAAATTCAAAGAACAGAGAACAACTCGCGATCGAAATAAACAATTAATCGAAGAAGAGATCACGAGACTCACCTTGATCGTAGCTTGCGACTTGAGA
GAGAATTGAGATGGTTGATTTTTTTTTAATTTATCGAATTCGAAACCTAATTTGTGAAGGAGAGAGGAGGTCTCAAGG