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Detailed information on CNT3095105


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 8e-162

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-170

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3044330Solanum tuberosumPrunus dulcis78.3174.4186.15910forward
CNT30636104Solanum tuberosumCapsicum annuum78.9275.3586.7917forward
CNT30233220Solanum tuberosumBrassica oleracea66.6199.8784.63774forward
CNT30510145Solanum tuberosumSolanum lycopersicum56.374694.81655forward
CNT30171101Solanum tuberosumTrifolium pratense78.5754.984.56913forward
CNT30147063Solanum tuberosumMedicago truncatula77.2881.7983.07898forward
CNT30312659Solanum tuberosumCamelina sativa78.5746.3784.56913forward
CNT30217431Solanum tuberosumKalanchoe fedtschenkoi78.3167.2183.74910forward
CNT30704859Solanum tuberosumPrunus avium78.3175.2786.15910forward
CNT3026527Solanum tuberosumPopulus trichocarpa77.9792.7384.77906forward
CNT30114615Solanum tuberosumEutrema salsugineum78.3192.7684.95910forward

Expression of CNT3095105

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSKVMVFPVKVFTKICIPPLSLSTK*

>peptide 2 (86 aa)
MGNRHSQTTRQPTTGNLKTTTETEDKVQSGLLLDIVVGKGASIFKLLTSKDQPLLVWWDPLLVLNLSFHIVDGVRTLHLQGDGLPG*

>peptide 3 (73 aa)
MQTHNHHNGQQTQPDNTTTNNRQLKNHHGDGGQGAEWTPSGYCSRQGCVHLQAAYQQRSTSAGLVGSPPCPES*

>peptide 4 (31 aa)
IVIAKWCNRRRQKQKQILKLRSEKKPEIGCS*

>peptide 5 (53 aa)
MPSLSWILALTLSMVSELSTSRVIVLPVRVLTKICIPPRRRSTKWRVDSFWML*

>peptide 6 (43 aa)
MVSELSTSKVMVFPVRVLTKICIPPRRRRTRWRGRLLLDVVVS*

Sequence

>CNT3095105
TATAGTAATTGCAAAGTGGTGTAATAGACGGAGGCAAAAGCAAAAACAAATACTCAAACTGCGATCAGAAAAGAAACCAGAAATTGGATGTTCATAAAGA
CGCCATTATTATTCACAAATGAGAAACAGAAAGGAACAGAAAGCGAAAACACATTGATGATCCTTTAAGACCATAATGCAAACACATAACCACCACAATG
GGCAACAGACACAGCCAGACAACACGACAACCAACAACAGGCAACTTAAAAACCACCACGGAGACGGAGGACAAGGTGCAGAGTGGACTCCTTCTGGATA
TTGTAGTCGGCAAGGGTGCGTCCATCTTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGAATCTTAGCTT
TCACATTGTCGATGGTGTCAGAACTCTCCACCTCCAAGGTGATGGTCTTCCCGGTTAAGGTCTTCACAAAGATCTGCATTCCTCCCCTCAGCCTCAGCAC
CAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTGCGGCCATCCTCCAATTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGA
ATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTATCAATGGTGTCGGAGCTTTCAACCTCCAAAGTGATGGTCTTCCCGGTGAGGGTCTTAACAAAAA
TCTGCATACCACCACGGAGACGGAGGACAAGATGGAGGGGTAGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTGCGGCCATCTTCCAACTGTTTCCCTG
CAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCCTGGATCTTAGCCTTAACATTGTCAATGGTGTCTGAGCTTTCGACCTCAAGGGTAAT
CGTCTTACCCGTAAGAGTCTTAACGAAGATCTGCATACCACCACGTAGACGGAGCACCAAATGGAGGGTAGACTCCTTCTGGATGTTGTAATCAGCTAGA
GTACGTCCGTCCTCCAACTGCTTTCCGGCGAAGATAAGCCTTTGCTGATCCGGGGGAATTCCTTCCTTATCCTGAATCTTAGCCTTAACGTTGTCGATTG
TATCAGAACTTTCCACCTCTAGGGTGATGGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGC