Detailed information on CNT30160455


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-147

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377890Pistacia veraArabidopsis thaliana39.4868.4984.78552forward

Expression of CNT30160455

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MTNSETPTETEHKMQGGLLLNVVISKGPSILKLLPSKNQPLLVWWDPLLILDLSLNIVNGI*

>peptide 2 (94 aa)
MGDCLSSEGFYKDLHTTPETKDQVKGGLFLNVIVSKCASILKLFAGKDKPLLVWGNPFLVLNFGFDIVNGVGAFHLKGDCLSSEGFHEDLHTTP*

>peptide 3 (31 aa)
MVSELSTSRVIVFPVRVFTKICIPPLRRRTK*

>peptide 4 (40 aa)
MVSELSTSKVMVFPVRVFTKICIPPRRRRTKWRVDSFWML*

>peptide 5 (44 aa)
MPSLSCILAFTLSIVSELSTSKVMVFPVRVFTKICIPPLSRRTK*

Sequence

>CNT30160455
CTGTTATTATTAACTCAGGCAAAGCAAACAAATAGGCATTGGCTCAAGTGAGATCATACACCAAGGATATATACTAAGCGCCATAATATGTATTTATTTA
ATATAAGTTCTTAGAACTGATATACATGATCTAAAGAACGCCCATATCAGCATCTAAGAAACACAGCGCAAAAAGCATAAAAACTAAAAAACTTAAAATA
GAGTTTTTACAACTTATTTAAGACATTAAATATTGGCCAGCGGCCAGACCACACCACACAAACAACCACATATCCAACATAATGGAAACAAACCAGATTC
AAATAAGCACATGACCAATTCAGAAACCCCCACGGAGACGGAGCACAAGATGCAGGGTGGACTCCTTCTGAATGTTGTAATCAGCAAGGGTCCTTCCATC
CTCAAGCTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTATCCTGGATCTTAGCCTTAACATTGTCAATGGTATCTGAACTC
TCAACCTCCAAGGTAATGGTCTTCCCAGTGAGGGTCTTCACAAAAATCTGCATACCACCTCGGAGGCGAAGAACCAAGTGGAGGGTTGACTCCTTCTGGA
TGTTGTAGTCAGCAAGAGTACGACCATCCTCAAGTTGTTTACCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGTATCTTGGC
CTTTACATTGTCAATAGTGTCAGAGCTCTCAACTTCCAAGGTAATGGTTTTTCCAGTAAGGGTTTTCACAAAGATCTGCATACCACCCCTGAGTCGAAGG
ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGTGTGCGTCCATCCTCAAGTTGTTTGCCAGCGAAGATAAGCCTCTGCTGGTCTGGTG
GGATTCCTTCCTTATCCTGAATTTTGGCTTTGACATTGTCAATGGGTGATTGTCTTTCCAGTGAGGGTTTTTACAAAGATCTGCATACCACCCCTGAGAC
GAAGGACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAGTCAGCAAGTGTGCGTCCATCCTCAAGTTGTTTGCCGGCAAAGATAAGCCTTTGCTGGTC
TGGGGGAATCCCTTCCTTGTCCTGAATTTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGGGTGATTGTCTTTCCAGTGAGGGTTTTC
ACGAAGATCTGCATACCACCCCTTAGACGGAGGACCAAGTGAAGGGTTGACTCTTTCTGGATGTTATAATCTGCAAGTGTACGCCCATCCTCGAGTTGTT
TACCAGCAAAGATAAGCCTTTGCTGGTCTGGCGGGATCCCTTCCTTGTCCTGAATTTTGGCCTTGACATTGTCAATGGTGTCAGAGCTTTCCACCTCA