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Detailed information on CNT30625786


BLAST search results

BLAST vs Swiss-Prot:
sp|P26791|HSP70_DAUCA, E-value = 1e-116

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697157Daucus carotaOryza sativa7.4928.8389.0664forward
CNT30520761Daucus carotaSetaria italica7.3824.4288.8963forward
CNT30640495Daucus carotaNymphaea colorata16.6335.0680.99142forward
CNT30224773Daucus carotaHordeum vulgare8.5529.890.4173forward
CNT30562094Daucus carotaActinidia chinensis14.7524.1884.92126forward
CNT30552909Daucus carotaOryza glaberrima7.6123.6489.2365forward
CNT30440625Daucus carotaAegilops tauschii13.8241.9988.98118forward
CNT30665093Daucus carotaTriticum dicoccoides14.754090.48126forward
CNT30449535Daucus carotaSaccharum spontaneum16.5134.2287.23141forward
CNT30143339Daucus carotaLolium perenne12.7628.9988.99109forward
CNT301752Daucus carotaZea mays6.9122.6188.1459forward
CNT30367474Daucus carotaSorghum bicolor10.330.9990.9188forward
CNT30369767Daucus carotaOryza glumipatula10.1933.8590.887forward
CNT30116284Daucus carotaOryza nivara10.1932.3491.9587forward

Expression of CNT30625786

Peptides detected in this lncRNA

>peptide 1 (32 aa)
SIVNNETSKVPPPRSKISTFCSPRLLDFLSSP*

>peptide 2 (80 aa)
FDRQQRNIKSPTPKIKNQHVLLAAIARLLIEPVSNRGRSRLVDYPHDIQPRDHPRILRRLPLRIIKISRNRYNSIIHTVP*

>peptide 3 (31 aa)
MTLKGQSFMSDWTEGSLNLRPMRRSVSVKAT*

>peptide 4 (37 aa)
MFVFQCGVRLMCGMGFIGVSLGEKRREDGRDRGSERS*

>peptide 5 (42 aa)
LRSSTTKHQKSHPQDQKSARSARRDCSTSYRARKQSRPQSAR*

>peptide 6 (44 aa)
MGETEEVRGVEMKREGSREGELGVEFTKRGSSAVERGRDCSVSFW

>peptide 7 (55 aa)
MISTRSFCQTPTQLYVVPRSIPIALPPLLAIVISYLQKAFVLVFVCLLCLFFSVE*

Sequence

>CNT30625786
CTTCGATCGTCAACAACGAAACATCAAAAGTCCCACCCCCAAGATCAAAAATCAGCACGTTCTGCTCGCCGCGATTGCTCGACTTCTTATCGAGCCCGTA
AGCAATCGCGGCCGCAGTCGGCTCGTTGATTATCCTCATGACATTCAGCCCCGCGATCACCCCCGCATCCTTCGTCGCCTGCCTCTGCGAATCATTAAAA
TAAGCAGGAACCGTTACAACAGCATCATTCACACTGTGCCCTAGAAACGCCTCTGCAATCTCGCGCATCTTGATTAAGACCATTGAAGAAATCTCCTCGG
CGGCGAACTGCTTTGACTCGCCTTTATAGTTGACGACGATCATCGGCTTCTCGCCGGGGCCGGGGATGACCTTGAAGGGCCAGAGCTTCATGTCTGACTG
GACGGAAGGGTCGTTGAATCTCCGGCCGATGAGGCGCTCCGTGTCGGTGAAGGCCACGTAGGAGGGGGTGGTGCGGTTGCCTTGGTCGTTGGCGATGATC
TCGACGCGGTCGTTTTGCCAGACGCCGACGCAGCTGTATGTGGTGCCGAGATCTATCCCGATCGCCTTGCCACCTTTGCTAGCCATCGTGATCAGTTACT
TACAGAAAGCTTTTGTTCTTGTGTTTGTTTGTTTATTATGTTTGTTTTTCAGTGTGGAGTGAGATTGATGTGTGGGATGGGTTTTATAGGAGTGAGTTTG
GGAGAGAAGAGACGAGAAGATGGGAGAGACAGAGGAAGTGAGAGGAGTTGAGATGAAGCGGGAGGGTTCTAGAGAGGGGGAGTTGGGGGTTGAGTTTACT
AAAAGGGGCTCCAGTGCTGTGGAGAGAGGTCGAGATTGTTCTGTTAGTTTCTGG