Detailed information on CNT30520761


BLAST search results

BLAST vs Swiss-Prot:
sp|O65719|HSP7C_ARATH, E-value = 8e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697157Setaria italicaOryza sativa42.2549.193.58109forward
CNT30295130Setaria italicaTriticum aestivum42.259.7888.07109reverse complement
CNT30224773Setaria italicaHordeum vulgare5052.6594.57129forward
CNT30395728Setaria italicaTriticum turgidum42.6424.5592.73110forward
CNT30568742Setaria italicaActinidia chinensis34.8841.6784.4490forward
CNT30552909Setaria italicaOryza glaberrima39.9237.4593.2103forward
CNT30440625Setaria italicaAegilops tauschii21.7119.9392.8656forward
CNT30665093Setaria italicaTriticum dicoccoides43.0235.2495.5111forward
CNT30449535Setaria italicaSaccharum spontaneum43.827.4395.58113forward
CNT30143339Setaria italicaLolium perenne41.4728.4691.59107forward
CNT301752Setaria italicaZea mays43.0242.5387.39111forward
CNT30625786Setaria italicaDaucus carota24.427.3888.8963forward
CNT30367474Setaria italicaSorghum bicolor43.4139.4497.32112forward
CNT30369751Setaria italicaOryza glumipatula43.0245.4993.69111forward
CNT30578215Setaria italicaOryza barthii43.815.7892.92113forward

Expression of CNT30520761

Peptides detected in this lncRNA

>peptide 1 (84 aa)
KDGVDGVHGDLVLGGISDEALGIGEGDVRGGGAVPLVDADRRPVALPRHLFFSLPAVAELQRLCEGPEGGEDGTRSCGGGWRTRV

>peptide 2 (84 aa)
KTVLMGFMATWFLAASPMRRSESVKATYEGVVRFPWSMPIAGPSPFPAISSSHYRRSRSCSGFARDRRVGKMGRGVAAAGGGLGF

Sequence

>CNT30520761
CAAAGACGGTGTTGATGGGGTTCATGGCGACCTGGTTCTTGGCGGCATCTCCGATGAGGCGCTCGGAATCGGTGAAGGCGACGTACGAGGGGGTGGTGCG
GTTCCCCTGGTCGATGCCGATCGCCGGCCCGTCGCCCTTCCCCGCCATCTCTTCTTCTCACTACCGGCGGTCGCGGAGCTGCAGCGGCTTTGCGAGGGAC
CGGAGGGTGGGGAAGATGGGACGCGGAGTTGCGGCGGCGGGTGGAGGACTAGGGTTTC