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Detailed information on CNT30440625


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697157Aegilops tauschiiOryza sativa17.4422.0793.8849forward
CNT30520761Aegilops tauschiiSetaria italica19.9321.7192.8656forward
CNT30640495Aegilops tauschiiNymphaea colorata47.6933.0984.33134forward
CNT30224773Aegilops tauschiiHordeum vulgare46.9853.8891.67132forward
CNT30394412Aegilops tauschiiTriticum turgidum91.4630.0696.11257forward
CNT30569551Aegilops tauschiiActinidia chinensis49.1113.6987.68138forward
CNT30172487Aegilops tauschiiTrifolium pratense45.5539.7582.81128forward
CNT30665093Aegilops tauschiiTriticum dicoccoides90.0480.3298.02253forward
CNT3079894Aegilops tauschiiBrassica juncea43.4243.7383.61122forward
CNT30449535Aegilops tauschiiSaccharum spontaneum50.5334.4796.48142forward
CNT30143339Aegilops tauschiiLolium perenne38.7928.9990.83109forward
CNT301752Aegilops tauschiiZea mays48.0451.7290.37135forward
CNT30625786Aegilops tauschiiDaucus carota41.9913.8288.98118forward
CNT30685689Aegilops tauschiiTriticum urartu51.9656.5997.26146forward
CNT30479018Aegilops tauschiiArabidopsis halleri34.8830.3482.6598forward
CNT30369767Aegilops tauschiiOryza glumipatula25.6228.0293.0672forward
CNT30116284Aegilops tauschiiOryza nivara28.4729.7488.7580forward

Expression of CNT30440625

Peptides detected in this lncRNA

>peptide 1 (92 aa)
PKTVLMGFMALRVGEGDVRGRGAVALVVGDDLDPVVLPHADARVGGAEVDADGRPLALGRRHGSSLIEKKEAKLGARVRVCGAFAQLLAAAAA

Sequence

>CNT30440625
CACCGAAGACGGTGTTGATGGGGTTCATGGCGCTCCGAGTCGGTGAAGGCGACGTACGAGGGCGTGGTGCGGTTGCCCTGGTCGTTGGCGATGATCTCGA
CCCGGTCGTGCTGCCACACGCCGACGCACGAGTAGGTGGTGCCGAGGTCGATGCCGATGGCCGGCCCCTCGCCCTTGGTCGGCGCCATGGCTCTAGCTTG
ATCGAGAAGAAGGAAGCTAAGCTTGGAGCTAGGGTTAGGGTTTGTGGAGCCTTTGCGCAGCTGCTGGCGGCGGCTGCTGCG