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Detailed information on CNT30369767


BLAST search results

BLAST vs Swiss-Prot:
sp|P27322|HSP72_SOLLC, E-value = 1e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640495Oryza glumipatulaNymphaea colorata52.5333.3385.93135forward
CNT30535611Oryza glumipatulaEucalyptus grandis53.315.4594.16137forward
CNT30224773Oryza glumipatulaHordeum vulgare43.5845.7191.07112forward
CNT30395728Oryza glumipatulaTriticum turgidum53.3130.5889.78137forward
CNT30569551Oryza glumipatulaActinidia chinensis45.9111.7186.44118forward
CNT30172487Oryza glumipatulaTrifolium pratense48.2538.5183.06124forward
CNT30440625Oryza glumipatulaAegilops tauschii28.0225.6293.0672forward
CNT30665093Oryza glumipatulaTriticum dicoccoides53.3143.4993.43137forward
CNT3079894Oryza glumipatulaBrassica juncea49.4245.5282.68127forward
CNT30449535Oryza glumipatulaSaccharum spontaneum52.5332.7793.33135forward
CNT30143339Oryza glumipatulaLolium perenne51.7535.3792.48133forward
CNT301752Oryza glumipatulaZea mays52.9252.1188.24136forward
CNT30625786Oryza glumipatulaDaucus carota33.8510.1990.887forward
CNT30479018Oryza glumipatulaArabidopsis halleri46.6937.1583.33120forward
CNT30367474Oryza glumipatulaSorghum bicolor52.5347.5493.33135forward
CNT30116284Oryza glumipatulaOryza nivara50.9748.790.08131forward

Expression of CNT30369767

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MISTRSMPMAGPSPLPAMDADVSLEYAGGGG*

>peptide 2 (59 aa)
EDGVDGVHGDLVLGSISDEPLGVGEADVGGGGAVALVVGDDLHAVDADGRTLALARHGC*

Sequence

>CNT30369767
CGAAGACGGTGTTGATGGGGTTCATGGCGACCTGGTTCTTGGCAGCATCTCCGATGAGCCTCTCGGAGTCGGTGAAGCCGACGTAGGAGGGGGTGGTGCG
GTTGCCCTGGTCGTTGGCGATGATCTCCACGCGGTCGATGCCGATGGCCGGACCCTCGCCCTTGCCCGCCATGGATGCTGATGTTTCTCTCGAGTACGCC
GGCGGCGGCGGCTAGGGTTTGGGGAGGAGGAAGAGTGGGAGAGGAAGACTAGATGCC