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Detailed information on CNT30394412


BLAST search results

BLAST vs Swiss-Prot:
sp|P25840|HSP70_CHLRE, E-value = 1e-24

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30562094Triticum turgidumActinidia chinensis16.1426.4988.41138forward
CNT30510806Triticum turgidumSolanum lycopersicum10.4130.884.2789forward
CNT30440625Triticum turgidumAegilops tauschii30.0691.4696.11257forward
CNT30665093Triticum turgidumTriticum dicoccoides30.6483.1796.95262forward
CNT3079894Triticum turgidumBrassica juncea14.2743.7383.61122forward
CNT30138690Triticum turgidumLolium perenne25.3845.388.48217forward
CNT30685689Triticum turgidumTriticum urartu19.0663.1895.09163forward
CNT30595552Triticum turgidumOryza meridionalis7.3727.8890.4863forward
CNT30154479Triticum turgidumPrunus persica25.2649.7784.72216forward
CNT30550306Triticum turgidumOryza brachyantha18.8339.7584.47161forward

Expression of CNT30394412

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MPPGMSAPAPWYILAMMGLQRPSSSFILSSNSSTSPSWLASSHWIAASTASSIFFLSSAGSLEAIFSSWMVFLML*

>peptide 2 (31 aa)
MSQNMHHCIVHDTHKSRDATDQKVQQNFQPR*

Sequence

>CNT30394412
CAACAACCAAATTTAAGCTAAGAATTCAGAATGAAATCACACGGGTAGGGTAGTCCAAATAATAAGCATTAAGCTGAAATCAACAATGAGCCAAAACATG
CATCATTGCATTGTTCACGACACACACAAGTCTCGTGATGCTACAGACCAAAAAGTACAACAAAACTTCCAGCCCAGGTGATATGATTGGCACCCAGGAC
TGAATAAAATGGTGTATAGTGTATTTCTCACTATATAAAAGCGACTAACTTAGTCGACCTCCTCGATCTTGGGGCCAGCACCGCCGCTCGCAGCCGGCGC
GTCCTCGTCCATGCCTCCGGGCATGTCAGCACCGGCGCCCTGGTACATCTTGGCGATGATGGGGTTGCAGAGGCCCTCCAGCTCCTTCATCTTGTCCTCA
AACTCGTCAACCTCACCGAGCTGGTTGGCGTCAAGCCACTGGATCGCGGCGTCAACGGCGTCCTCGATCTTCTTCTTGTCATCAGCAGGCAGCTTGGAGG
CGATCTTCTCGTCCTGGATGGTGTTCCTCATGTTGTAGGCGTAGTTCTCCAGGGAGTTCTTGGCGTCAACCTTCTTCTTGCGCTCCGAGTCGGTGAAGGC
GACGTACGAGGGCGTGGTGCGGTTGCCCTGGTCGTTGGCGATGATCTCGACGCGGTCGTGCTGCCACACGCCGACGCACGAGTAGGTGGTGCCGAGGTCG
ATGCCGATGGCCGGCCCCTCGCCCTTGGTCGGCGCCATGGCTCTAGCTAGATCGAGAGGAAGGAAGCTAAGCTAGCTATGGACTAGGGTTAGGGTTTGTC
GAGCCTTTGCGCAGCTGCTGGCGGCGGCTGCTGCGGACTCGGGAGAGGAGGAGGC