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Detailed information on CNT30422640


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30405509Papaver somniferumBeta vulgaris24.214.183.8499forward
CNT30526207Papaver somniferumPhaseolus vulgaris31.7811.2984.62130forward
CNT30631224Papaver somniferumVigna unguiculata31.7815.9582.31130forward
CNT30711417Papaver somniferumGlycine max38.398.7784.08157forward
CNT3045175Papaver somniferumPrunus dulcis31.0527.7384.25127forward
CNT3085509Papaver somniferumVigna radiata26.1625.9785.98107forward
CNT30540898Papaver somniferumBrassica napus20.2914.9386.7583forward
CNT30238548Papaver somniferumBrassica oleracea20.299.8587.9583forward
CNT30173588Papaver somniferumTrifolium pratense36.1914.8183.11148forward
CNT30145816Papaver somniferumMedicago truncatula37.657.484.42154forward
CNT3077678Papaver somniferumBrassica juncea20.2913.5486.7583forward
CNT30264123Papaver somniferumBrassica rapa20.299.186.7583forward
CNT30607765Papaver somniferumGossypium raimondii27.6316.8987.61113forward
CNT30210187Papaver somniferumHelianthus annuus30.3215.1686.29124forward
CNT30718929Papaver somniferumMalus domestica golden34.9615.4184.62143forward
CNT30359130Papaver somniferumLactuca sativa52.8142.686.11216forward
CNT30118654Papaver somniferumCitrus clementina37.1628.2584.21152forward
CNT3037927Papaver somniferumCucumis melo34.2329.2986.43140forward
CNT30329767Papaver somniferumDioscorea rotundata51.5934.4882.94211forward
CNT30725047Papaver somniferumLupinus angustifolius43.0322.0384.66176forward

Expression of CNT30422640

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MANLPFFTSFNFNSFIDFSSFPNPSGLKKGPPG*

Sequence

>CNT30422640
TTATTTAAGATGATATTATTTAAAATAAATTCACCATAATATAAACCAGTTTATCTAATCTTAATTACAAATTACAAGAGTCTCCATAAACTTTCACAAA
TAAAGAGAAAAGGAGAAAATAAAAAGGAAAATAGAGAAGAGAATAATGAAGTCCCAGAGTACAAGAACCTGGGCATAGAAATTTAATGGAACTTGAGACT
GGTCAAGACATTGTTGTTGACTGGATCAGCCAAATGGTCCAACTCCTGTGACTAAACCTTGAATGAAATAACCTAAAATAGCCAACATGGCCAATCTTCC
ATTCTTCACTTCCTTCAACTTCAATTCCTTCATTGACTTCTCATCTTTTCCAAATCCTAGTGGGTTAAAGAAAGGTCCACCCGGGTAAGCAGGGTTACCC
GATCCACCC